Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02282 ATGTGCATGGCATGGCATGTTTTCCACTTTAGGTTGTTTTGTTTACTTCTTTTCTGGGTTGGTTCACGGTTTTGTGTTGCTGTCTGGCCCGGTTTCTTGTCATGTTCTGCTATGATAGTTGGAGATCTTGCCTGTGTCTTTGTCCGTTTGCTGTTCTGTGAAGGTTTCATTTCATTTGCAAATGAGATCTTTACAGTTTATGAAGGGATTCTATGTTCGAAGTCAACATTGATCTATTACATCAGTAGGGAGCCGAGTGATGGTGCCAAACCAGTTATGGTTTGCACTGCCAATGATTTACAAGGATGGAAAGATTTTCCAAAGGGACTCAGGGTTCTTGTACTTGACGGAGATAGAAGTTCTGCTGCTGAGATAGGAGAACAACTTGAGGCCATGGAGTATAATGTTTCTACCTTCTATGACGAGAATGAAGCTTTGTCAGCAATCTCAACTAGTCCTCAAGGCTTCCATGTTGCCATAGTGGAGGTGAGTACAAGCAGCAGCCTTGGAGGTTTCAAATTTCTTGAAAATGCAAAGGACTTGCCTACCATTATGGTTTCAAAGAACCAGTGCCTGAACACCACGATGAAGTGCATTGCGCTTGGTGCCGTTGAGTTTCTCAATAAACCACTCTCTGAGGACAAGCTCAAAAATATTTGGCAGCATGTTGTTCACAAGGCCTTTAATTCTGGGGCGAATGGTCTGTCTGAATCACTAAAACCTGTGAAAGAATCTGTAGAATCAGTGCTGCAGCTTCAAACAGGCAATGATGAACAAGATAAAACTCATAAAAGGACAATGTCGATTGATTTAGAGAATGTGTCCAGGTTTGATGATGATAACAATGAGCAATCTGTTTGTGATAAATATCCGGCTCCTTCAACCCCACAATTGAAACATGGAACACGGTCATTGGATGATGGAGATTGCCATGAGCAGACTAATTTTTCAACAGAAAAAGAAAGTGGAGAACATGATGGGGAATGCAAATCAGTCGAAACTTCATGTGAAAATTTGAATGCTGAAAGTTCTCCTCAACCAACTGAACCTGAGGAGACTCTGATTAAGGAGGAAGAGGATTTTGCCAATGGTTCCAAGGGCGAGAGAGCTGTTTCACTGAATCTACATAATGAAAAGTTTCTCAGCAATGCAGATGGTCATACATCTCCAAAAAAGATGGAAGTTCTTAATGATTCATGTGAGATTAAAGCTAACAGGAAGAAGATGAAAGTAGACTGGACGCCCGAGCTGCATAAAAAATTTGTAAAGGCTGTTGAACAACTAGGTATTGATCAAGCCATTCCATCTAGAATATTGGAGATAATGAAAGTGGAAGGTTTGACAAGGCACAATGTGGCAAGCCATCTTCAGAAATATAGAATGCACAAGAGACAGAGTGCACCTGGGGAAGAAGATCGAAAATGGCATAATCAAAGAGATGCAATGCAGAGGAGCTTTTATCTGCAAAGACCAATCATGGCCTACCCTCCCTATCATTCTACTCAAACCCTTTCTCCAGGTCCTATATATCCTATGTGGGGACAACCAGGAAGTCAAACAGCTGGTGTGCAGATTTGGGGGCCTCCTGCATACCCCTTGTGGCATCCTACAGAAAGTTGGAACTGGAAGCCTTATCCAGGGATGCATGTGGATGCTTGGGGATGCCCATTGTTTCCACCTCCTCAAGCTCCTGGTTTTCACTTCAATCAAAATATACCTGGATTGCAGACTCCTAAACCAGTGGATTATAGATTCATCATGCCACGTAGTTCCTTTGAGCATCATCCGGCAGAGGAGGTGGTAGACAAGGTTGTGAAAGAAGCAATTAACAAGCCATGGCTACCATTGCCCTTAGGACTCAAAGCACCTTCCACAGATAGTGTGTTGGCTGAGCTCTCCAAACAAGGCATATCTAGCATCCCTCTTGGCAACAAGGGTTCTTCTGCTCCAAAACCCTGCTGA 1962 0.4297 MCMAWHVFHFRLFCLLLFWVGSRFCVAVWPGFLSCSAMIVGDLACVFVRLLFCEGFISFANEIFTVYEGILCSKSTLIYYISREPSDGAKPVMVCTANDLQGWKDFPKGLRVLVLDGDRSSAAEIGEQLEAMEYNVSTFYDENEALSAISTSPQGFHVAIVEVSTSSSLGGFKFLENAKDLPTIMVSKNQCLNTTMKCIALGAVEFLNKPLSEDKLKNIWQHVVHKAFNSGANGLSESLKPVKESVESVLQLQTGNDEQDKTHKRTMSIDLENVSRFDDDNNEQSVCDKYPAPSTPQLKHGTRSLDDGDCHEQTNFSTEKESGEHDGECKSVETSCENLNAESSPQPTEPEETLIKEEEDFANGSKGERAVSLNLHNEKFLSNADGHTSPKKMEVLNDSCEIKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRMHKRQSAPGEEDRKWHNQRDAMQRSFYLQRPIMAYPPYHSTQTLSPGPIYPMWGQPGSQTAGVQIWGPPAYPLWHPTESWNWKPYPGMHVDAWGCPLFPPPQAPGFHFNQNIPGLQTPKPVDYRFIMPRSSFEHHPAEEVVDKVVKEAINKPWLPLPLGLKAPSTDSVLAELSKQGISSIPLGNKGSSAPKPC 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02282 653 Gene3D - 404 465 - -
Viun2g02282 653 MobiDBLite consensus disorder prediction 252 353 - -
Viun2g02282 653 PANTHER TRANSCRIPTION ACTIVATOR GLK1 93 641 IPR044825 GO:0003700|GO:0045893
Viun2g02282 653 ProSiteProfiles Response regulatory domain profile. 111 224 IPR001789 GO:0000160
Viun2g02282 653 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 405 464 IPR017930 -
Viun2g02282 653 MobiDBLite consensus disorder prediction 257 285 - -
Viun2g02282 653 SUPERFAMILY Homeodomain-like 407 464 IPR009057 -
Viun2g02282 653 MobiDBLite consensus disorder prediction 302 332 - -
Viun2g02282 653 MobiDBLite consensus disorder prediction 333 350 - -
Viun2g02282 653 FunFam Two-component response regulator-like APRR2 109 234 - -
Viun2g02282 653 SMART REC_2 110 220 IPR001789 GO:0000160
Viun2g02282 653 NCBIfam myb-like DNA-binding domain, SHAQKYF class 408 463 IPR006447 GO:0003677
Viun2g02282 653 Gene3D - 110 234 - -
Viun2g02282 653 SUPERFAMILY CheY-like 108 226 IPR011006 -
Viun2g02282 653 Pfam Response regulator receiver domain 112 218 IPR001789 GO:0000160
Viun2g02282 653 MobiDBLite consensus disorder prediction 287 301 - -
Viun2g02282 653 Pfam Myb-like DNA-binding domain 411 460 IPR001005 -
Viun2g02282 653 FunFam Two-component response regulator 404 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02282 Viun-Chr2 30364776 30370617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02282 93 641 Response Regulator Gene Family AT4G18020 48.370 1.91e-139 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Viun2g02282 Response_reg 4.4e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02282 - - vun:114173738 1331.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02282 2 30364776 30370617 Viun3g04037 3 48011144 48016901 PCT