Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02263 ATGGGAAGCAATGGACTCTGCAATCTCTTTTCTTGTTTCAAAGGCGCTTCAAACCATGGCCATGGCCATGCTCATGGGAACGGCCATGGCCATAACCAGAACCAGTTGGTTTTTGCGGAGACAGAGCCATTGGACGAAACCCTAGGCCACTCTTTCTGCTATGTCAGATCCTCTGCGCGCTTTCTCTCTCCCTCTCATTCCGATCGCATCCTCTCGCCCTCCAACTCTCTCCGCTACTCTCCTTCTCATCGCTCCGATTTCCCCGAAACCGCATTCAAGGCCATTTCCGGCGCTTCAGTCAGCGCCAACAGCTCGGTGCCCAAAGCCGTGCTCCAGTCCGAGGATGACGACACCACCGTCAATGGCTTCATAGGAACAGCGTCCTTCAGCGCTCTCCCTCTGCAGCCCGCGCCGAGAGGGGGAGAAACTGCGGCCTCGGAGAGGGAGCGGAAAGCGTTCTTTCTCTCGGGGCCAATTGAGAGCGGCGCGCTCTCGGGACCCCTCGACGACGCCGTTTCGAGTTCTGGGCCAGTGCCCTTCTCTGCCCCGCTCGGGAGTGGAGTGTACGTGAAGAAGAAGCGGAAGAAGAGCATTGCCGGGCTGCGAAAAGCCTTCCAGCGGAGTCTCTCGGAGAAGAAGCGGCCTTGGGTGGTGCCGGTGGGGCGGAAGGGGAAGACGGAAGCGACGAGCGAGACGGAGAACGAGAGCAATGTGCAGTGGGCGCTGGGAAAAGCGGGGGAGGATCGTGTGCATGTCGTTGTATCGGAAGAACAGGGCTGGTTGTTCGTAGGGATATACGACGGTTTCAATGGCCCTGACGCGCCGGAGTTTCTCATGGGTAATCTTTACCGTGCCCTTCACAAAGAGCTCCAGGGTTTGTTTTGGGAACTTGAAGAACCGCAGTCGCAGGTGCAGGGAACTAACCCTGCACCTGAGGTGGAGAATAATGACGCTGAACCCCAGAATGAGGTGGCGGTGGAAGAAGACTCCAATTCTCTCCGAGGATCGGTTAAGAGAGTGACGTTTCAAGCGGAGGGGACTGAAAGTAGGAGGAGAAGGCTGTGGGAGTTTCTGGCTGAGGAGGATGATGCGGAGAACGGGCTCGATCTTTCCGGGTCTGATAGGTTTGCGTTTTCGGTTGATGATGCGCTCAGTGCTAGCAAAGAGGCTTCGGGAGGTAGTAGACGGTGGTTGATTTTGTCTAAGTTGAAGCATGGGTTATCGAGGCATAAAGAGGGTCATGGGAGGAGATTTTTGCCGTGGAACTTGGGCGTGGGGGAGGAGAAGGAGAAGGTTGAGGTGGAAAATCCAACGACGGCAGAGGAGCAGGGGGAGAAGGGTCACGGTGGGAGGAAGCGAAAAGTGGGGCCTGTGGATCATGAGTTGGTTTTGGGAGCGTTGTCTAGGGCGCTTGAGATAACTGAGCTTGCTTATTTGGATATGACGGATAAGCTGATTGATACCAATCCGGAGCTTGCTCTGATGGGGTCGTGTCTGTTGGCTGTGTTGATGAGGGATGAGGATGTTTATGTTATGAACGTGGGGGATAGCCGCGCCATTGTGGCACATTATGAGTGTGGGGAGGTTCACGCTACTAGTAAGGAAACGGGAAGTGGTGGAGGCACTGGGTCAAGCGGGGAGTGCATAGTGGAGGAGTCTTCGGCTCCGGACGAACGTGGTGTCGTGTTGGGGAATGAGGGTCCTGCTAGGGAACGGAGGTTGGTTGCATTGCAGCTGTCCACTGATCACAGCACCAGCATTGAAGAGGAAGTTATTAGAATTAAGAATGAGCATCCTGATGATAGCCATTGTATCGTGAATGATAGAGTGAAAGGCCGTCTTAAGGTTACTAGAGCTTTTGGTGCTGGATTTTTGAAACAGCCAAAGTGGAATGATGTGGTGCTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCATGCTGCCCTTCATTACGTCACCATAGATTATGCTCTAGAGATCAGTTCTTGATCCTCTCATCTGATGGTTTGTATCAATACCTAAGCAATCAAGAAGTTGTTTCTCAGGTCGAGAGCTTCATGGAAAAGTTTCCGGATGGAGATCCTGCCCAGCATTTAATAGAGGAGCTGCTCCTACGTGCTGCCAAGAAGGCTGGAATGGATTTCCATGAGTTGCTGGATATCCCTCAAGGAGACCGGAGGAAGTATCATGATGATGTGACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCATCAGGGAAGTATCCGTGA 2271 0.528 MGSNGLCNLFSCFKGASNHGHGHAHGNGHGHNQNQLVFAETEPLDETLGHSFCYVRSSARFLSPSHSDRILSPSNSLRYSPSHRSDFPETAFKAISGASVSANSSVPKAVLQSEDDDTTVNGFIGTASFSALPLQPAPRGGETAASERERKAFFLSGPIESGALSGPLDDAVSSSGPVPFSAPLGSGVYVKKKRKKSIAGLRKAFQRSLSEKKRPWVVPVGRKGKTEATSETENESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRALHKELQGLFWELEEPQSQVQGTNPAPEVENNDAEPQNEVAVEEDSNSLRGSVKRVTFQAEGTESRRRRLWEFLAEEDDAENGLDLSGSDRFAFSVDDALSASKEASGGSRRWLILSKLKHGLSRHKEGHGRRFLPWNLGVGEEKEKVEVENPTTAEEQGEKGHGGRKRKVGPVDHELVLGALSRALEITELAYLDMTDKLIDTNPELALMGSCLLAVLMRDEDVYVMNVGDSRAIVAHYECGEVHATSKETGSGGGTGSSGECIVEESSAPDERGVVLGNEGPARERRLVALQLSTDHSTSIEEEVIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYISCCPSLRHHRLCSRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02263 756 MobiDBLite consensus disorder prediction 429 455 - -
Viun2g02263 756 SUPERFAMILY PP2C-like 244 745 IPR036457 -
Viun2g02263 756 MobiDBLite consensus disorder prediction 532 562 - -
Viun2g02263 756 Pfam Protein phosphatase 2C 562 712 IPR001932 -
Viun2g02263 756 SMART PP2C_4 231 742 IPR001932 -
Viun2g02263 756 Gene3D - 203 751 IPR036457 -
Viun2g02263 756 PANTHER PROTEIN PHOSPHATASE 2C 223 743 IPR015655 GO:0004722|GO:0006470
Viun2g02263 756 CDD PP2Cc 447 744 IPR001932 -
Viun2g02263 756 ProSiteProfiles PPM-type phosphatase domain profile. 228 744 IPR001932 -
Viun2g02263 756 MobiDBLite consensus disorder prediction 535 549 - -
Viun2g02263 756 MobiDBLite consensus disorder prediction 300 315 - -
Viun2g02263 756 MobiDBLite consensus disorder prediction 300 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02263 Viun-Chr2 30257417 30262845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02263 1 755 PP2C-type Phosphatase Gene Family AT2G35350 55.961 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02263 - - gmx:100775371 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02263 2 30257417 30262845 Viun3g04028 3 47875934 47881098 PCT