Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g02247 | ATGCCTCAGCCATTGTTTCTGTTTTTACTTTTATGTACATTGTTCTCAAATGGTTTATCCCAAACGGTTTCCCTCCAAAGAGAGACTCGAATTTTACTTCGGGTTAAGAACACCCAGCTTGAAGACAACAACAAGAGTCTCCATGACTGGGTTCCAAACGCAGACCACAACCCCTGCAACTGGACCGGCATTACCTGCGACGCACAAAACCAATCACTTGTCTCTATTGACCTCTCAGAAATTGGAATCTACGGCGAGTTCCCCTTCGGTTTTTGTCGCATTCACACCCTCCAAAACCTCTCTCTCGGATCCAATTTTCTCTCCAACTCTGTCTCCCCCAACTCCCTGCTCCTCTGTTCCCACCTCCGTCTCTTGAACCTCTCCGACAATGTCTTCGTTGGAGACCTGCCGGAATTCCCGCCGGAGTTTACCGAACTTAGAGTGTTAGACCTTTCGACAAACAACTTCACTGGCAACATTCCGGAGAGTTTTGGACAGATTCCACGTCTGAGAGTGCTCAATTTATGCGGAAACCTTCTGAGCGGAACGATCCCTCCCTTTTTAGGCAACCTCAGTGAGTTAACTCGTTTGGAACTAGCTTATAACACCTTCAAACCAGGACCGTTGCCTCCCCAACTAGGAAACCTCTTTAGTCTTGAAACACTGTTCCTCGCTGGTGTTAACCTCGTAGGGGAAATTCCACCCACTATCGGGAACCTCACCTCGCTCAAAAACTTAGATTTATCTAAAAACGGGTTGTGTGGTAACATCCCAAACAGCATTTCAGGCCTGAAAAACGTTGAACAAATTGAACTATTTGAAAACCAGCTTTCCGGTGAATTACCCCAAGGTTTAGGAAACCTCAGTAGTTTAATGCTCTTGGACCTCTCTCAGAACGGTCTCACCGGGAAACTACCACATGCAATCGCATCTTTGCGTCTCTATTCTCTCAACCTGAATGACAACCTTCTTGGGGGGGAAATTCCTGAAAGTTTAGCTTCAAACCCCAACCTGCAAGAGCTGAAACTCTTCAACAACAGCTTCACCGGGACACTTCCACAAGATCTGGGACAAAACTCCGACATACAGGAATTCGATGTCTCGACGAATGACTTCTTGGGAGAGTTGCCAAAGTACCTCTGCAAGAGAAACAAACTCGAGCGTCTCATCACGTTCGCGAATCGCTTCTCAGGAACGCTCCCTGAGCCATACGGGGAGTGCGATTCTCTTTATTATGTCAGAATCCAGAACAACCAGTTATCAGGCCAGGTGCCTCCCGCTTTTTGGACCCTTACTGGGCTTCAGTTTCTTGAAATGTCCAACAACAGGTTTGAAGGCTCTGTCTCTGCTTCCATCTCTACGGCACTCACCAAACTCATTTTGTCTGGTAACGATTTTTCTGGCAAATTCCCAACGCGAATATGTCAACTCCCTAACCTTCTGGAGATTGACGTCAGCAAGAACCGCTTCACCGGAGAAGTTCCCACGTGCATAACTGGGTTGAAAAAGTTACAGAAACTTAAGATGCAGGAGAACATGTTCATCGGCGAGATACCCAGTAACGTGGCCCTCTGGAACGACATGACAGAGTTGAACCTGTCGTTTAACCGATTCTCCGGTTCAATCCCGCGAGAACTTGGCAGTTTACAGGATTTGACAAACCTTGATCTCGCCAGTAATTCTTTAACGGGGGAGATTCCGGTGGAGTTGACGAACCTCAGATTCAACCAGTTCAACGTTTCTGACAACAATCTTTACGGGGAGGTTCCTTCAGGTTTCAACCGCCAAATGTACTTTTCCAGTCTAGAGGGAAACCCGGGTCTGTGCAGCGGCGTGATCAAAACCCTACCTCCTTGTTCGAAACGCAGGCCGTTTTCTCTGCTTGCGATTGTCGTTTTAGTTGCCTGCGCTTCGCTCCTGGTGGGGTCCATGTTGTGGTACCTGAAGAGCAAGACGCGCGGTAAATCCAAGCAATCGTATATGTCAACCTCGTTTCAGAGGGTTGGGTTCAACGAAGAAGAAATTATTTCAAACTTAACCCGGGAGAACGTGATTGGAGCAGGGAGTTCGGGTCGGGTATATAGGGTGAGGCTGAAGACGGGGCAGACGGTGGCAGTGAAGAAGCTGTTCGGCGGTGTGCATAAGTCTGACACCGAATTGGTGTTCAGGGCGGAGATTGAGACGTTGGGTAGGATTCGGCATGCCAATATCGTGAAACTGTTGTTTAGTTGCAGTGGTGATGAGTTTAGGGTATTGGTGTATGAGTACATGGAGAAGGGGAGCTTAGGGGATGCGTTGCATGGTGAGGAAATGTGTGGGGAGTTGAAGGAGTGGTCGAGAAGGTTTGCAATTGCGGTGGGTGCGGCTAAGGGGTTGGCTTATTTGCACCATGATTGTGTGCCGCCAATTGTTCACAGGGACGTGAAGAGTAATAACATTTTGCTGGACCACGAGTTTGTGCCAAGAGTCGCAGACTTTGGCCTCGCTAAGACATTGCAGCTTGAGACAACCCAGGATGCTGTTATGTCCAAGGTTGCTGGATCATATGGCTACATTGCTCCAGAGTATGGTTATACAATGAAAGTGAACGAGAAGAGCGATGTGTATAGTTTTGGCGTTGTGCTGATGGAATTGATCACCGGGAAGAGGCCAAATGACTGTTCATTTGGTGAGAACAAGGACCTAGTGAAATGGATGACTGAGATTGTTTTGTCACCGTCTTCTGAAAGAGGAAGTGGCAATGTGGGAGGTGGTAAAGATGCTATTATGACCAAGATTGTGGACCCAAGATTGAACCCAAGCACTTGTGACTATGGAGAGGTCGAGAAGGTTTTAAATGTGGCCCTACTCTGCACCTCGGCGTTTCCCATTAATAGACCGTCGATGAGAAGGGTGGTTGAATTGCTGAAGGACCATAAACTGCCATGA | 2928 | 0.4781 | MPQPLFLFLLLCTLFSNGLSQTVSLQRETRILLRVKNTQLEDNNKSLHDWVPNADHNPCNWTGITCDAQNQSLVSIDLSEIGIYGEFPFGFCRIHTLQNLSLGSNFLSNSVSPNSLLLCSHLRLLNLSDNVFVGDLPEFPPEFTELRVLDLSTNNFTGNIPESFGQIPRLRVLNLCGNLLSGTIPPFLGNLSELTRLELAYNTFKPGPLPPQLGNLFSLETLFLAGVNLVGEIPPTIGNLTSLKNLDLSKNGLCGNIPNSISGLKNVEQIELFENQLSGELPQGLGNLSSLMLLDLSQNGLTGKLPHAIASLRLYSLNLNDNLLGGEIPESLASNPNLQELKLFNNSFTGTLPQDLGQNSDIQEFDVSTNDFLGELPKYLCKRNKLERLITFANRFSGTLPEPYGECDSLYYVRIQNNQLSGQVPPAFWTLTGLQFLEMSNNRFEGSVSASISTALTKLILSGNDFSGKFPTRICQLPNLLEIDVSKNRFTGEVPTCITGLKKLQKLKMQENMFIGEIPSNVALWNDMTELNLSFNRFSGSIPRELGSLQDLTNLDLASNSLTGEIPVELTNLRFNQFNVSDNNLYGEVPSGFNRQMYFSSLEGNPGLCSGVIKTLPPCSKRRPFSLLAIVVLVACASLLVGSMLWYLKSKTRGKSKQSYMSTSFQRVGFNEEEIISNLTRENVIGAGSSGRVYRVRLKTGQTVAVKKLFGGVHKSDTELVFRAEIETLGRIRHANIVKLLFSCSGDEFRVLVYEYMEKGSLGDALHGEEMCGELKEWSRRFAIAVGAAKGLAYLHHDCVPPIVHRDVKSNNILLDHEFVPRVADFGLAKTLQLETTQDAVMSKVAGSYGYIAPEYGYTMKVNEKSDVYSFGVVLMELITGKRPNDCSFGENKDLVKWMTEIVLSPSSERGSGNVGGGKDAIMTKIVDPRLNPSTCDYGEVEKVLNVALLCTSAFPINRPSMRRVVELLKDHKLP | 975 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g02247 | 975 | SMART | serkin_6 | 679 | 975 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g02247 | 975 | Gene3D | Phosphorylase Kinase; domain 1 | 651 | 756 | - | - | |
Viun2g02247 | 975 | SUPERFAMILY | RNI-like | 69 | 381 | - | - | |
Viun2g02247 | 975 | ProSiteProfiles | Protein kinase domain profile. | 679 | 975 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g02247 | 975 | FunFam | Leucine-rich repeat receptor-like protein kinase | 757 | 974 | - | - | |
Viun2g02247 | 975 | FunFam | Leucine-rich repeat receptor-like protein kinase | 25 | 186 | - | - | |
Viun2g02247 | 975 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 803 | 815 | IPR008271 | GO:0004672|GO:0006468 | |
Viun2g02247 | 975 | Gene3D | Ribonuclease Inhibitor | 312 | 624 | IPR032675 | - | |
Viun2g02247 | 975 | SUPERFAMILY | Protein kinase-like (PK-like) | 667 | 969 | IPR011009 | - | |
Viun2g02247 | 975 | FunFam | Leucine-rich receptor-like protein kinase family protein | 209 | 307 | - | - | |
Viun2g02247 | 975 | Pfam | Leucine rich repeat N-terminal domain | 27 | 67 | IPR013210 | - | |
Viun2g02247 | 975 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 194 | 970 | - | - | |
Viun2g02247 | 975 | SUPERFAMILY | L domain-like | 313 | 609 | - | - | |
Viun2g02247 | 975 | ProSitePatterns | Protein kinases ATP-binding region signature. | 685 | 708 | IPR017441 | GO:0005524 | |
Viun2g02247 | 975 | Pfam | Protein kinase domain | 681 | 886 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g02247 | 975 | Gene3D | Transferase(Phosphotransferase) domain 1 | 757 | 974 | - | - | |
Viun2g02247 | 975 | Gene3D | Ribonuclease Inhibitor | 23 | 205 | IPR032675 | - | |
Viun2g02247 | 975 | Gene3D | Ribonuclease Inhibitor | 206 | 311 | IPR032675 | - | |
Viun2g02247 | 975 | Pfam | Leucine rich repeat | 145 | 202 | IPR001611 | GO:0005515 | |
Viun2g02247 | 975 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 309 | 621 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g02247 | Viun-Chr2 | 30125176 | 30129265 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g02247 | 23 | 973 | Receptor kinase-like Gene Family | AT5G65710 | 56.732 | 0.0 | 1046 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Viun2g02247 | Pkinase | 5.9e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g02247 | - | - | gmx:100813889 | 1551.95 |