Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02247 ATGCCTCAGCCATTGTTTCTGTTTTTACTTTTATGTACATTGTTCTCAAATGGTTTATCCCAAACGGTTTCCCTCCAAAGAGAGACTCGAATTTTACTTCGGGTTAAGAACACCCAGCTTGAAGACAACAACAAGAGTCTCCATGACTGGGTTCCAAACGCAGACCACAACCCCTGCAACTGGACCGGCATTACCTGCGACGCACAAAACCAATCACTTGTCTCTATTGACCTCTCAGAAATTGGAATCTACGGCGAGTTCCCCTTCGGTTTTTGTCGCATTCACACCCTCCAAAACCTCTCTCTCGGATCCAATTTTCTCTCCAACTCTGTCTCCCCCAACTCCCTGCTCCTCTGTTCCCACCTCCGTCTCTTGAACCTCTCCGACAATGTCTTCGTTGGAGACCTGCCGGAATTCCCGCCGGAGTTTACCGAACTTAGAGTGTTAGACCTTTCGACAAACAACTTCACTGGCAACATTCCGGAGAGTTTTGGACAGATTCCACGTCTGAGAGTGCTCAATTTATGCGGAAACCTTCTGAGCGGAACGATCCCTCCCTTTTTAGGCAACCTCAGTGAGTTAACTCGTTTGGAACTAGCTTATAACACCTTCAAACCAGGACCGTTGCCTCCCCAACTAGGAAACCTCTTTAGTCTTGAAACACTGTTCCTCGCTGGTGTTAACCTCGTAGGGGAAATTCCACCCACTATCGGGAACCTCACCTCGCTCAAAAACTTAGATTTATCTAAAAACGGGTTGTGTGGTAACATCCCAAACAGCATTTCAGGCCTGAAAAACGTTGAACAAATTGAACTATTTGAAAACCAGCTTTCCGGTGAATTACCCCAAGGTTTAGGAAACCTCAGTAGTTTAATGCTCTTGGACCTCTCTCAGAACGGTCTCACCGGGAAACTACCACATGCAATCGCATCTTTGCGTCTCTATTCTCTCAACCTGAATGACAACCTTCTTGGGGGGGAAATTCCTGAAAGTTTAGCTTCAAACCCCAACCTGCAAGAGCTGAAACTCTTCAACAACAGCTTCACCGGGACACTTCCACAAGATCTGGGACAAAACTCCGACATACAGGAATTCGATGTCTCGACGAATGACTTCTTGGGAGAGTTGCCAAAGTACCTCTGCAAGAGAAACAAACTCGAGCGTCTCATCACGTTCGCGAATCGCTTCTCAGGAACGCTCCCTGAGCCATACGGGGAGTGCGATTCTCTTTATTATGTCAGAATCCAGAACAACCAGTTATCAGGCCAGGTGCCTCCCGCTTTTTGGACCCTTACTGGGCTTCAGTTTCTTGAAATGTCCAACAACAGGTTTGAAGGCTCTGTCTCTGCTTCCATCTCTACGGCACTCACCAAACTCATTTTGTCTGGTAACGATTTTTCTGGCAAATTCCCAACGCGAATATGTCAACTCCCTAACCTTCTGGAGATTGACGTCAGCAAGAACCGCTTCACCGGAGAAGTTCCCACGTGCATAACTGGGTTGAAAAAGTTACAGAAACTTAAGATGCAGGAGAACATGTTCATCGGCGAGATACCCAGTAACGTGGCCCTCTGGAACGACATGACAGAGTTGAACCTGTCGTTTAACCGATTCTCCGGTTCAATCCCGCGAGAACTTGGCAGTTTACAGGATTTGACAAACCTTGATCTCGCCAGTAATTCTTTAACGGGGGAGATTCCGGTGGAGTTGACGAACCTCAGATTCAACCAGTTCAACGTTTCTGACAACAATCTTTACGGGGAGGTTCCTTCAGGTTTCAACCGCCAAATGTACTTTTCCAGTCTAGAGGGAAACCCGGGTCTGTGCAGCGGCGTGATCAAAACCCTACCTCCTTGTTCGAAACGCAGGCCGTTTTCTCTGCTTGCGATTGTCGTTTTAGTTGCCTGCGCTTCGCTCCTGGTGGGGTCCATGTTGTGGTACCTGAAGAGCAAGACGCGCGGTAAATCCAAGCAATCGTATATGTCAACCTCGTTTCAGAGGGTTGGGTTCAACGAAGAAGAAATTATTTCAAACTTAACCCGGGAGAACGTGATTGGAGCAGGGAGTTCGGGTCGGGTATATAGGGTGAGGCTGAAGACGGGGCAGACGGTGGCAGTGAAGAAGCTGTTCGGCGGTGTGCATAAGTCTGACACCGAATTGGTGTTCAGGGCGGAGATTGAGACGTTGGGTAGGATTCGGCATGCCAATATCGTGAAACTGTTGTTTAGTTGCAGTGGTGATGAGTTTAGGGTATTGGTGTATGAGTACATGGAGAAGGGGAGCTTAGGGGATGCGTTGCATGGTGAGGAAATGTGTGGGGAGTTGAAGGAGTGGTCGAGAAGGTTTGCAATTGCGGTGGGTGCGGCTAAGGGGTTGGCTTATTTGCACCATGATTGTGTGCCGCCAATTGTTCACAGGGACGTGAAGAGTAATAACATTTTGCTGGACCACGAGTTTGTGCCAAGAGTCGCAGACTTTGGCCTCGCTAAGACATTGCAGCTTGAGACAACCCAGGATGCTGTTATGTCCAAGGTTGCTGGATCATATGGCTACATTGCTCCAGAGTATGGTTATACAATGAAAGTGAACGAGAAGAGCGATGTGTATAGTTTTGGCGTTGTGCTGATGGAATTGATCACCGGGAAGAGGCCAAATGACTGTTCATTTGGTGAGAACAAGGACCTAGTGAAATGGATGACTGAGATTGTTTTGTCACCGTCTTCTGAAAGAGGAAGTGGCAATGTGGGAGGTGGTAAAGATGCTATTATGACCAAGATTGTGGACCCAAGATTGAACCCAAGCACTTGTGACTATGGAGAGGTCGAGAAGGTTTTAAATGTGGCCCTACTCTGCACCTCGGCGTTTCCCATTAATAGACCGTCGATGAGAAGGGTGGTTGAATTGCTGAAGGACCATAAACTGCCATGA 2928 0.4781 MPQPLFLFLLLCTLFSNGLSQTVSLQRETRILLRVKNTQLEDNNKSLHDWVPNADHNPCNWTGITCDAQNQSLVSIDLSEIGIYGEFPFGFCRIHTLQNLSLGSNFLSNSVSPNSLLLCSHLRLLNLSDNVFVGDLPEFPPEFTELRVLDLSTNNFTGNIPESFGQIPRLRVLNLCGNLLSGTIPPFLGNLSELTRLELAYNTFKPGPLPPQLGNLFSLETLFLAGVNLVGEIPPTIGNLTSLKNLDLSKNGLCGNIPNSISGLKNVEQIELFENQLSGELPQGLGNLSSLMLLDLSQNGLTGKLPHAIASLRLYSLNLNDNLLGGEIPESLASNPNLQELKLFNNSFTGTLPQDLGQNSDIQEFDVSTNDFLGELPKYLCKRNKLERLITFANRFSGTLPEPYGECDSLYYVRIQNNQLSGQVPPAFWTLTGLQFLEMSNNRFEGSVSASISTALTKLILSGNDFSGKFPTRICQLPNLLEIDVSKNRFTGEVPTCITGLKKLQKLKMQENMFIGEIPSNVALWNDMTELNLSFNRFSGSIPRELGSLQDLTNLDLASNSLTGEIPVELTNLRFNQFNVSDNNLYGEVPSGFNRQMYFSSLEGNPGLCSGVIKTLPPCSKRRPFSLLAIVVLVACASLLVGSMLWYLKSKTRGKSKQSYMSTSFQRVGFNEEEIISNLTRENVIGAGSSGRVYRVRLKTGQTVAVKKLFGGVHKSDTELVFRAEIETLGRIRHANIVKLLFSCSGDEFRVLVYEYMEKGSLGDALHGEEMCGELKEWSRRFAIAVGAAKGLAYLHHDCVPPIVHRDVKSNNILLDHEFVPRVADFGLAKTLQLETTQDAVMSKVAGSYGYIAPEYGYTMKVNEKSDVYSFGVVLMELITGKRPNDCSFGENKDLVKWMTEIVLSPSSERGSGNVGGGKDAIMTKIVDPRLNPSTCDYGEVEKVLNVALLCTSAFPINRPSMRRVVELLKDHKLP 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02247 975 SMART serkin_6 679 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02247 975 Gene3D Phosphorylase Kinase; domain 1 651 756 - -
Viun2g02247 975 SUPERFAMILY RNI-like 69 381 - -
Viun2g02247 975 ProSiteProfiles Protein kinase domain profile. 679 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02247 975 FunFam Leucine-rich repeat receptor-like protein kinase 757 974 - -
Viun2g02247 975 FunFam Leucine-rich repeat receptor-like protein kinase 25 186 - -
Viun2g02247 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Viun2g02247 975 Gene3D Ribonuclease Inhibitor 312 624 IPR032675 -
Viun2g02247 975 SUPERFAMILY Protein kinase-like (PK-like) 667 969 IPR011009 -
Viun2g02247 975 FunFam Leucine-rich receptor-like protein kinase family protein 209 307 - -
Viun2g02247 975 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Viun2g02247 975 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 194 970 - -
Viun2g02247 975 SUPERFAMILY L domain-like 313 609 - -
Viun2g02247 975 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Viun2g02247 975 Pfam Protein kinase domain 681 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02247 975 Gene3D Transferase(Phosphotransferase) domain 1 757 974 - -
Viun2g02247 975 Gene3D Ribonuclease Inhibitor 23 205 IPR032675 -
Viun2g02247 975 Gene3D Ribonuclease Inhibitor 206 311 IPR032675 -
Viun2g02247 975 Pfam Leucine rich repeat 145 202 IPR001611 GO:0005515
Viun2g02247 975 FunFam Leucine-rich repeat receptor-like protein kinase TDR 309 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02247 Viun-Chr2 30125176 30129265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02247 23 973 Receptor kinase-like Gene Family AT5G65710 56.732 0.0 1046
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun2g02247 Pkinase 5.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02247 - - gmx:100813889 1551.95