Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02232 ATGCTTTCTGCTCTTCCCTCTTCCGATTCTCTGCTGGGAAATGCATTCCCAGCCTTCGACTATGCTCTCGGGCCCTGGGATGGGCCTGAGTTTTTTAGCTTCAAGCCCACTAGCCCCAACCCCGTCACCTCCAGTTCCGCTTCGGACGACCCCAACCCAACCCCTGCCGACCAAAAACCGGCCTCGGACCAGTCGAACCGCGTTGTGTCCCTCACGGAGGAGCGAAAACGCAGGAGGATGATATCGAACCGGGATTCGGCCCGAAGGTCACGCATGCGTAAACAGAGACACCTAGAGAACTTACGGAACCAGACGAACCTGTTTCGCGTTGAAAACCGGGAACTGAACAACGGGTTTCAGTTCCTCCTTCACCACTGTAACCGTCTACGAACCGAAAACGAGTGGCTCCGGTCCGAACGAACCCTGCTCCGCCAAAAACTGGCCGACATAAATCAAATTTTGCTTTTCCGACAATTGCAACCATTTTCCACTGCATGGCCGTGCAATATTGTCATGGCAGAATAA 525 0.539 MLSALPSSDSLLGNAFPAFDYALGPWDGPEFFSFKPTSPNPVTSSSASDDPNPTPADQKPASDQSNRVVSLTEERKRRRMISNRDSARRSRMRKQRHLENLRNQTNLFRVENRELNNGFQFLLHHCNRLRTENEWLRSERTLLRQKLADINQILLFRQLQPFSTAWPCNIVMAE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02232 174 FunFam BZIP transcription factor 73 124 - -
Viun2g02232 174 SUPERFAMILY Leucine zipper domain 75 127 IPR046347 GO:0003700|GO:0006355
Viun2g02232 174 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Viun2g02232 174 MobiDBLite consensus disorder prediction 69 88 - -
Viun2g02232 174 Coils Coil 84 104 - -
Viun2g02232 174 PANTHER BZIP TRANSCRIPTION FACTOR 44 38 157 - -
Viun2g02232 174 MobiDBLite consensus disorder prediction 36 68 - -
Viun2g02232 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Viun2g02232 174 MobiDBLite consensus disorder prediction 32 94 - -
Viun2g02232 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Viun2g02232 174 CDD bZIP_plant_GBF1 76 127 IPR045314 GO:0003700|GO:0006355
Viun2g02232 174 Pfam bZIP transcription factor 74 134 IPR004827 GO:0003700|GO:0006355
Viun2g02232 174 Gene3D - 73 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02232 Viun-Chr2 29969354 29970604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02232 10 158 bZIP Transcription Factor Family AT3G49760 38.411 1.41e-31 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun2g02232 bZIP_1 3.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02232 - - gmx:102661188 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02232 2 29969354 29970604 Viun3g03973 3 47143533 47144613 PCT