Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02215 ATGGCACGTTCCTTGTGCCCATCCCTTCCGAACACTTCCACCTTCTCTGATTTCTGCAAACTATACTCTTCCTCTCACCATTTATGTTTCCACTCCCCAAAATCAAACCTGCAATTTAAGCCTCGTCGGGGCCCAGAAGCGCGGCCGCTGGGTAACCGGAAGAAGGGAAGTTCAAGGAAGCTTACTGCGTCGAGCGAAGGAGCGAATGGTTATGGGAGTATAGACGCAGAGGGGTATCATGGGTCGGTGGAAGATAAGCAATTCGTACGTTCCTTTCGCGAGGCCTGGCCTTACTTGTGGGCCTATCGTGGCAGCACCTTCGTTGTCATTATTTCTGGAGAAATTGTTTCTAGTCCTTTCCTAGATCCCATTCTCAAGGACATAGCTTTCCTTCATCACCTAGGAATTCGGTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTCTGAATGAGAGAGGGTGCCAGCCTAAGTATGTTGGTAGATATAGGATAACCGATGAAGCATCTCTAGAAGCTGCGATGGAAGCCGCGGGGGGAATAAGATTGATGATCGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAATATTCGTCGACACGGCGACAATAGTCGATGGCATGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAGTGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTATCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTAGCAACAGCTTGTGCCTTGGCTATGGGAGCAGACAAGTTGATATGCCTTATAGATGGTCCAATACTTGATGAGAATGGACGCTTAATTCGTTTCTTGCCTCTCGAAGAAGCAGACATGCTAATTCGTAAACGGGCTGAGCAAAGTGAAGCAGCTGCTAACTATGTTAAAGTTGTTGATGAAGAAGGTTTCAACTCTCCTGAATATAACAATTTTAATGGAATAGTCAAACCACCACCTATTGGGCGTTTTACAGAATGGCATAAAGCAACCTTCCATAATGGTGTTGGTTTTGAAAGTGGAAATGGCTTAGAGTCCAGTGAGCAAGGTTTTGCCATTGGAGGTCAAGAGCGATTAAGTCGAATGCATGGTTACCTGTCAGAGTTGGCTGCTGCCGCTTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGACGGAATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGACAGCAGAGGTGAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGATGAGCTCTTGCAAACATTGGATTCATTCGTTGTTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCCTTTTTCCTCACTTTGAGGAGAAGTGCGGGGAAGTTGCTTGCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGTGACAAATTGCTCGATTATGTGGAGATGAAAGCATCGTATCTTGGATTGAATATGCTTTTCCTGCTAACTACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCTATTGATTATATTCCTGAAAAGAAGAGGAGAAAGATCAATCTTTCTCGCAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAAAGTGGAATAACTGTTGGTGTAAAATCTGCTTCAAGCTAG 1848 0.4443 MARSLCPSLPNTSTFSDFCKLYSSSHHLCFHSPKSNLQFKPRRGPEARPLGNRKKGSSRKLTASSEGANGYGSIDAEGYHGSVEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIVSSPFLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLNERGCQPKYVGRYRITDEASLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVSGIDFGSTGEVKKVDVSRMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAMGADKLICLIDGPILDENGRLIRFLPLEEADMLIRKRAEQSEAAANYVKVVDEEGFNSPEYNNFNGIVKPPPIGRFTEWHKATFHNGVGFESGNGLESSEQGFAIGGQERLSRMHGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEASGILVKRTDDELLQTLDSFVVVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYVEMKASYLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRKINLSRNSKYYMKKLLPNKSGITVGVKSASS 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02215 615 Gene3D - 86 452 IPR036393 -
Viun2g02215 615 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 456 602 IPR016181 -
Viun2g02215 615 Pfam Acetyltransferase (GNAT) domain 493 571 IPR000182 GO:0016747
Viun2g02215 615 Pfam Amino acid kinase family 107 319 IPR001048 -
Viun2g02215 615 NCBIfam amino-acid N-acetyltransferase 408 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun2g02215 615 CDD AAK_NAGS-ABP 87 447 IPR033719 -
Viun2g02215 615 Gene3D - 453 599 - -
Viun2g02215 615 CDD NAT_SF 494 556 - -
Viun2g02215 615 MobiDBLite consensus disorder prediction 37 69 - -
Viun2g02215 615 Hamap Amino-acid acetyltransferase [argA]. 87 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun2g02215 615 PANTHER AMINO-ACID ACETYLTRANSFERASE 47 607 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun2g02215 615 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 453 601 IPR000182 GO:0016747
Viun2g02215 615 SUPERFAMILY Carbamate kinase-like 401 449 IPR036393 -
Viun2g02215 615 SUPERFAMILY Carbamate kinase-like 86 322 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02215 Viun-Chr2 29899563 29908058 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun2g02215 AA_kinase 3.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02215 K14682 - gmx:100777694 975.311