Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02214 ATGGCGACGGCCACTTCAAAGGCAACCATATCTGTGCCTTTCCTTTCCCATGGCTCCACTCCTAACTTCCACTTCTTGCATCTTCTGTCACCACTCGCAACTGCAACCGTTCCTCGCCGTTCTTGTACTTTTAGGTCTCACAACAACAAAACGACACCGTTATCACCGAGAGACTGCGGCTGTCACCAAAGTCGCGCCGCCGGAGAAGACTTTGGCATCTCGGAGGAAGACGAAGAGTTCGTCAATGTTCTTAGGGAATCTCAATCCTACGTTTTGGTCCACAGAGCCAGTGTTTTCGTTGTGCTCATATCTGCAGAAGTTGTTGCCAGTCCTTACTTGGATCCCATTCTCAAGGACATAGCTTTCCTTCATCACCTAGGAATTCGGTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTCTGAATGAGAGAGGGTGCCAGCCTAAGTATGTTGGTAGATATAGGATAACCGATGAAGCATCTCTAGAAGCTGCGATGGAAGCCGCGGGGGGAATAAGATTGATGATCGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAATATTCGTCGACACGGCGACAATAGTCGATGGCATGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAGTGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTATCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTAGCAACAGCTTGTGCCTTGGCTATGGGAGCAGACAAGTTGATATGCCTTATAGATGGTCCAATACTTGATGAGAATGGACGCTTAATTCGTTTCTTGCCTCTCGAAGAAGCAGACATGCTAATTCGTAAACGGGCTGAGCAAAGTGAAGCAGCTGCTAACTATGTTAAAGTTGTTGATGAAGAAGGTTTCAACTCTCCTGAATATAACAATTTTAATGGAATAGTCAAACCACCACCTATTGGGCGTTTTACAGAATGGCATAAAGCAACCTTCCATAATGGTGTTGGTTTTGAAAGTGGAAATGGCTTAGAGTCCAGTGAGCAAGGTTTTGCCATTGGAGGTCAAGAGCGATTAAGTCGAATGCATGGTTACCTGTCAGAGTTGGCTGCTGCCGCTTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGACGGAATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGACAGCAGAGGTGAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGATGAGCTCTTGCAAACATTGGATTCATTCGTTGTTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCCTTTTTCCTCACTTTGAGGAGAAGTGCGGGGAAGTTGCTTGCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGTGACAAATTGCTCGATTATGTGGAGATGAAAGCATCGTATCTTGGATTGAATATGCTTTTCCTGCTAACTACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCTATTGATTATATTCCTGAAAAGAAGAGGAGAAAGATCAATCTTTCTCGCAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAAAGTGGAATAACTGTTGGTGTAAAATCTGCTTCAAGCTAG 1824 0.443 MATATSKATISVPFLSHGSTPNFHFLHLLSPLATATVPRRSCTFRSHNNKTTPLSPRDCGCHQSRAAGEDFGISEEDEEFVNVLRESQSYVLVHRASVFVVLISAEVVASPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLNERGCQPKYVGRYRITDEASLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVSGIDFGSTGEVKKVDVSRMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAMGADKLICLIDGPILDENGRLIRFLPLEEADMLIRKRAEQSEAAANYVKVVDEEGFNSPEYNNFNGIVKPPPIGRFTEWHKATFHNGVGFESGNGLESSEQGFAIGGQERLSRMHGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEASGILVKRTDDELLQTLDSFVVVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYVEMKASYLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRKINLSRNSKYYMKKLLPNKSGITVGVKSASS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02214 607 Gene3D - 445 591 - -
Viun2g02214 607 SUPERFAMILY Carbamate kinase-like 393 441 IPR036393 -
Viun2g02214 607 Hamap Amino-acid acetyltransferase [argA]. 75 591 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun2g02214 607 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 448 594 IPR016181 -
Viun2g02214 607 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 445 593 IPR000182 GO:0016747
Viun2g02214 607 PANTHER AMINO-ACID ACETYLTRANSFERASE 64 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun2g02214 607 CDD AAK_NAGS-ABP 79 439 IPR033719 -
Viun2g02214 607 SUPERFAMILY Carbamate kinase-like 78 314 IPR036393 -
Viun2g02214 607 CDD NAT_SF 486 548 - -
Viun2g02214 607 NCBIfam amino-acid N-acetyltransferase 400 591 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun2g02214 607 Gene3D - 78 444 IPR036393 -
Viun2g02214 607 Pfam Acetyltransferase (GNAT) domain 485 563 IPR000182 GO:0016747
Viun2g02214 607 Pfam Amino acid kinase family 112 311 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02214 Viun-Chr2 29899563 29911495 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun2g02214 AA_kinase 2.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02214 K14682 - gmx:100777694 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02214 2 29899563 29911495 Viun3g03958 3 46945414 46953756 PCT