Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02207 ATGGATACGACGTTGTTTGGGGTAGTGAGATTCCAACATCGGGTTCAAGGTGATCAAGATCAATCCCTCAACAACTCCACCACCACCAGCAGCTCTCGATCCTCCAGACAACACAACAATAACTATCCCTACCCACAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTATCCTCGTCTTCTTCTAAGCACTACTATCCCTATCAACCCCACCCTCACTCCACTACACCAACCACCACCACCACCGACCTCTCCTTCTCCCCCACTCGCGACGCCGCCTTCCCTTTCCAGCTCTCCGCCAAGTGGGCCAACGACATCCTCCTCGAAACCGCACGTGCCGTCTCCGACAAGAACACCACGCGCCTCCAACAACTCATGTGGATGCTCAACGAGCTCGCCTCCCCCTACGGCGACACAGACCAGAAACTCGCCTCCTACTTCCTCCAGGCCTTCTTCAGCCGCATCACCCAGGCCGGGGACCGGACCTATCGAACCTTAGCCTCGGCCTCCGAGAGAACGTGCTCCTTCGAATCCACGCGCAAGACCGTGCTGAAGTTCCAGGAGCTCAGTCCCTGGACAACCTTCGGACACGTGGCGTCCAATGGTGCCATCTTGGAAGCCTTGGAAGGCGAGCCCAAACTACACATAGTTGACATCAGCAACACCTATTGCACCCAATGGCCTACGCTCTTCGAAGCCTTGGCCACCCGAAACGACGACACCCCCCACCTCCGTCTCACCTCCCTCGTCACCGCCGCCTCCGCGCACAAGGTCATGAAGGAAATCGGCGCCAGAATGGAGAAATTCGCCAGACTCATGGGCGTGCCCTTTCAATTCAACGTCGTTCATCACTTAGGTCAACTTTCCGACTTCGATTTCAGCGCCTTGGATATCAAAGAGGACGAGGCTCTGGCTATTAACTGCGTCAATACTTTGCATTCGGTCTCCGCCATCGGGAACCACCGTGAAGCGGTGATATCCTCGTTGAGGAGGCTGCAGCCGAGGATCGTGACGGTGGTGGAGGAGGAGGCGGACTTGGACGTGGGATTGGAGGGGCTGGAGTTCGTGAAGGGGTTTGAAGAGTGTTTGAGGTGGTTTAGGGTTTACTTCGAAGCGTTAGAAGAGAGCTTTCCGAAGACGAGCAACGAGCGGTTGATGCTGGAGCGGGCGGCGGGTAGGGCGATGGTCGACCTGGTGGCGTGTTCGGCGGCGGATTCTGTGGAGCGGCGGGAGAGGGCGGGGCGGTGGACGAGGAGGATGCATGGAGTTGGATTCAATACGGTGGCGTTTAGCGAAGAGGTGTGTGATGACGTGAGAGCGTTGTTGAGGAGGTATAGGGAGGGATGGTCAATGGCACAGTGCTCCGACGCCGGAATATTCCTTTCGTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGGGCCTTGACGTAG 1449 0.5687 MDTTLFGVVRFQHRVQGDQDQSLNNSTTTSSSRSSRQHNNNYPYPQEDEECFNFFMDEEDLSSSSSKHYYPYQPHPHSTTPTTTTTDLSFSPTRDAAFPFQLSAKWANDILLETARAVSDKNTTRLQQLMWMLNELASPYGDTDQKLASYFLQAFFSRITQAGDRTYRTLASASERTCSFESTRKTVLKFQELSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPHLRLTSLVTAASAHKVMKEIGARMEKFARLMGVPFQFNVVHHLGQLSDFDFSALDIKEDEALAINCVNTLHSVSAIGNHREAVISSLRRLQPRIVTVVEEEADLDVGLEGLEFVKGFEECLRWFRVYFEALEESFPKTSNERLMLERAAGRAMVDLVACSAADSVERRERAGRWTRRMHGVGFNTVAFSEEVCDDVRALLRRYREGWSMAQCSDAGIFLSWKDQPVVWASAWRALT 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02207 482 MobiDBLite consensus disorder prediction 65 88 - -
Viun2g02207 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 91 472 IPR005202 -
Viun2g02207 482 Pfam GRAS domain family 109 479 IPR005202 -
Viun2g02207 482 MobiDBLite consensus disorder prediction 16 43 - -
Viun2g02207 482 ProSiteProfiles GRAS family profile. 98 479 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02207 Viun-Chr2 29869341 29871794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02207 37 479 GRAS Transcription Factor Family AT4G37650 61.446 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun2g02207 GRAS 6.7e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02207 - - gmx:100820459 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02207 2 29869341 29871794 Viun2g02207 2 29869341 29871794 ECH
Viun2g02207 2 29869341 29871794 Viun3g03942 3 46892353 46894405 PCT