LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun2g02206	ATGGGGAAGAAGCAACACAGTAAAGACAGGATGTTCATCACCAAAACGGAGTGGGCAACGGAATGGGGAGGCGCTAAATCCAAAAACAGTCGCACTCCCTTCAAACGTCTTCCCTTCTATTGCTGCGCGCTTACGTTTACGCCCTTTGAAGAACCTGTCTGCACTGCTGATGGCAGTGTTTTCGATATCATGAATATTACTCCCTATATTATAAAATACGGTAAACATCCAGTCACTGGAACTCCTCTCAAGCTGCCGGATCTCATTCCACTAACTTTCCACAAGAATTCAGAAGGAGAATATCACTGTCCAGTGCTAAACAAAGTTTTCACTGAATTTACACATATTGTGGCAGTGAAGACTACAGGAAATGTGTTCTGCTATGAGGCTGTTAAAGAGTTAAACATTAAGACAAAAAACTGGAAGGAGCTCCTCACTGATGAGCCATTCACAAGGGATGACCTTATAACCATTCAGAATCCTAATGCACTTGACGACAGGGTTCTTCTGGATTTTGATCATGTTAAAAATGATTTGAAAGTTGATGATGAGGAACTACAGAAAATGAGTTCAGATCCTACCTACAACATAAACATGTCGGGTGATATCAAGCAAATGCTTCAGGAGCTTGGAACTGATAAAGGAAAGGAAACTGCAATGCATGGGGGTGGTGGTGGCAAGGCACAAAAAGAAAGGGCTGCTGCACTTGCTGCCATCATAGCTGCAAGGTCCCGTGTGGATGAAGATTCCAAATCAAATCCAAATAAAGAGGCCAAAGCTCCTCAGGCATTCAGTATAGTAGATGCTGCATCTGCTGCAGTACATGGAAGAAGTGCAGCTGCTGCTAAAGCCTCATCAGGTGATAAAACTGCTGCTAGGATAGCTATGCATATGTCTGGTGACAGGGCGCCAGTGAATGCAAAGATGGTAAAAAGCCGTTTCACAACTGGTGCTGCTTCCCGTTCTTTTACTTCAACATCATTTGATCCAGTTACAAAAAATGAATTTGAATATGTGAAAGTTGAGAAGAATCCGAAAAAGAAGGGTTATGTACAGCTGCATACGACACATGGTGATTTGAACATTGAGCTACATTGTGATATAACGCCTAGGACGTGTGAAAACTTCATCACTCTTTGTGAGCGGGGATTTTATAATGGAGTTGTTTTTCATAGAAGCATTAGGAATTTTATGATACAGGGTGGTGATCCTACTGGTACTGGTCGAGGAGGTGAATCCATATGGGGAAAGCCTTTTAAAGATGAACTTAACTCCAAACTAGTTCACTCCGGAAGAGGTGTGGTAAGCATGGCAAATAGTGGCCCACACACCAATGGTTCCCAATTCTTCATCTTGTACAAGTCTGCAAATCATCTAAACTTCAAACACACAGTTTTTGGAGTAGTTGTAGGTGGCTTGACCACACTTGCTGCCATGGAAAAAGTTCCAGTTGATGATAATGACCGACCTCTGGAGGAAATCAAGATAACGAGTGTCACGATTTTTGTCAATCCTTACACGGAACCAGATGAAGGAGAAGAACAGGATAATGCCACAGAGAAGAATGTAGAGGATGAGGATAATGGTAAGGTAGGCTCATGGTTTAGCAATCCTGGTGCTGGAACATCTGAATCTGGAAGTACGGGGGTCGGTGGTGGTGTCGGCAAGTACTTGAAAGCTAGGAATGCTCAAGCTACATCTGCTAATCTTGATACCAGTACAGCCGTTGTAGGAAAGAAAAGAAAAGTGGGAGTTGCCAGCAGTGACTTCAAAGATTTTTCTGCATGGTAA	1791	0.4288	MGKKQHSKDRMFITKTEWATEWGGAKSKNSRTPFKRLPFYCCALTFTPFEEPVCTADGSVFDIMNITPYIIKYGKHPVTGTPLKLPDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAVKELNIKTKNWKELLTDEPFTRDDLITIQNPNALDDRVLLDFDHVKNDLKVDDEELQKMSSDPTYNINMSGDIKQMLQELGTDKGKETAMHGGGGGKAQKERAAALAAIIAARSRVDEDSKSNPNKEAKAPQAFSIVDAASAAVHGRSAAAAKASSGDKTAARIAMHMSGDRAPVNAKMVKSRFTTGAASRSFTSTSFDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRTCENFITLCERGFYNGVVFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGVVVGGLTTLAAMEKVPVDDNDRPLEEIKITSVTIFVNPYTEPDEGEEQDNATEKNVEDEDNGKVGSWFSNPGAGTSESGSTGVGGGVGKYLKARNAQATSANLDTSTAVVGKKRKVGVASSDFKDFSAW	596

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Viun2g02206	596	FunFam	Peptidyl-prolyl cis-trans isomerase cyp65	331	515	-	-
Viun2g02206	596	CDD	cyclophilin_RING	350	508	-	-
Viun2g02206	596	SMART	Ubox_2	39	101	IPR003613	GO:0004842\|GO:0016567
Viun2g02206	596	Pfam	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	350	500	IPR002130	GO:0000413\|GO:0003755
Viun2g02206	596	SUPERFAMILY	Cyclophilin-like	350	508	IPR029000	-
Viun2g02206	596	ProSiteProfiles	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.	354	501	IPR002130	GO:0000413\|GO:0003755
Viun2g02206	596	FunFam	Peptidyl-prolyl cis-trans isomerase 2	41	96	-	-
Viun2g02206	596	MobiDBLite	consensus disorder prediction	535	549	-	-
Viun2g02206	596	Gene3D	-	331	514	IPR029000	-
Viun2g02206	596	MobiDBLite	consensus disorder prediction	506	551	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun2g02206	Viun-Chr2	29857699	29864607	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun2g02206	1	596	U-box Gene Family	AT5G67530	75.748	0.0	912

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun2g02206	K10598		-	gmx:100819923	1064.68

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun2g02206	2	29857699	29864607	Viun2g02206	2	29857699	29864607	ECH

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