Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02198 ATGACTAACATGGTTTACAACCATTCTAAGTCTCTCCGAAATGGCAATAAATTAATTCCTATACCACCTACTATGTCACGTCGAATATCAATCAATTCATCTTGTGAGTGTAAGATATCTAATAATTCAAAATCAAGAAGACAAAACAACAATGACTCTTCATCAAAAAAGGATTTATGGGAGCGTCTATTTCATCAAGGTTATAAAGCAGATGTTTGCATTAACACTAATAGCGGTGGTGTTGTTTATGCTCATTCTAACATTATTGCCATGGCTTCTTCTGTATTAAGAGGCATGCTAAAGCAAGCACATCGATATGGTCGATGGCGAATCATCTCAATCATTGGAGTTCCACATGATGCAGTTCAAGTTTTTATTCGATATTTATACACTTATAGTTACGAGAAAGAAGATATGGATGAGTTTGTACTACATTTGTTGGTGTTATCACATGTATACATGGTTCCTCACTTGAAGTGTGAATGTGAACAAAAACTAGAATTGGGTTTACTCACTATAGATAACTTGGTTGACGTATTTCAACTAGCATTATTTTGTGATGCTCCAAGACTTAGTCTCATTTGCCATCGCAAGATACTGAAAAACTTCAAAGTCGTTTCAGAATCAGAAGGATGGAAAACAATGAAGTTAAGTCACCCACTTCTAGAAAAGGAAATTTTAGAGTCAATGATCGACGAAGAAAATATGAAAAAGGAAAGAATCCGAAAAATGAATGACAAAAAGGTATATCTACAATTGTACGAGGCCATGGAAGCTCTTGTTCATATATGTAGAGATGGTTGTCGAACTATTGGTCCTCACGATAAAGATCTTCGAGTAAACCAACCATGTAAGTATTCAACATGTAGCGGATTAGAGTTGCTTGTTCGTCATTTTGCTGCATGTAAGTTGAGAGTTCCTGGAGGTTGTGTTCATTGCAAGAGGATGTGGCAATTATTAGAGTTACACTCTCGATTATGTGTTAATCCAGACGATTGTAGAGTTCCTTTATGCAGGAACTTTAAGGAACGAATATCAAAACAAAGCAAGAAAGATGAAATTAGGTGGAAAATATTGGTTGAAAAGATCTTGAGAACAAGAGGAATCAGGATAGCATCATGTTTTTTGCAACAATGA 1137 0.3544 MTNMVYNHSKSLRNGNKLIPIPPTMSRRISINSSCECKISNNSKSRRQNNNDSSSKKDLWERLFHQGYKADVCINTNSGGVVYAHSNIIAMASSVLRGMLKQAHRYGRWRIISIIGVPHDAVQVFIRYLYTYSYEKEDMDEFVLHLLVLSHVYMVPHLKCECEQKLELGLLTIDNLVDVFQLALFCDAPRLSLICHRKILKNFKVVSESEGWKTMKLSHPLLEKEILESMIDEENMKKERIRKMNDKKVYLQLYEAMEALVHICRDGCRTIGPHDKDLRVNQPCKYSTCSGLELLVRHFAACKLRVPGGCVHCKRMWQLLELHSRLCVNPDDCRVPLCRNFKERISKQSKKDEIRWKILVEKILRTRGIRIASCFLQQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02198 378 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 42 373 IPR044513 -
Viun2g02198 378 FunFam BTB/POZ and TAZ domain-containing protein 2 172 242 - -
Viun2g02198 378 ProSiteProfiles BTB domain profile. 70 138 IPR000210 GO:0005515
Viun2g02198 378 Gene3D - 172 245 - -
Viun2g02198 378 Gene3D Potassium Channel Kv1.1; Chain A 37 171 IPR011333 -
Viun2g02198 378 Pfam BTB/POZ domain 62 166 IPR000210 GO:0005515
Viun2g02198 378 CDD BACK 172 229 - -
Viun2g02198 378 SMART TAZ_2 247 339 IPR000197 -
Viun2g02198 378 Pfam TAZ zinc finger 254 338 IPR000197 -
Viun2g02198 378 SUPERFAMILY POZ domain 49 166 IPR011333 -
Viun2g02198 378 ProSiteProfiles Zinc finger TAZ-type profile. 244 341 IPR000197 -
Viun2g02198 378 SMART BTB_4 70 170 IPR000210 GO:0005515
Viun2g02198 378 Gene3D TAZ domain 246 366 IPR035898 -
Viun2g02198 378 FunFam BTB/POZ and TAZ domain-containing protein 2 244 368 - -
Viun2g02198 378 SUPERFAMILY TAZ domain 246 347 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02198 Viun-Chr2 29814260 29817899 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Viun2g02198 BTB 7.4e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02198 - - var:108334777 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02198 2 29814260 29817899 Viun2g02198 2 29814260 29817899 ECH