Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02197 ATGAAAGCTCCTCACTTGAGCTTCTTCTACTTCCTCACACTGTTCCTCTTCCTATCCATCCCAGTCAACACTGCAAAAAGGGTCAATAGTAGTACCAGCGCTAATGAATCTGGCACAAGAAGAATTCTGCACCAGCCATTATTCCCGGCGAGTTCGGCACCACCACCACCACTTCCGGTGGAGACTCCGCCCTCTCCGGAAGGCGGAAACATCCCCTTCTTCCACGAGTACCCGGCGGGTCCCCCACCGGATCAGAGCCAAGCAGCCCCGTCGGGTTCCAACACTTCAATTGCAAACCCAACTGCGACACAACCCACAAAGGGAACAAAGAAAGTAGCAATCGCGATCTCAGTGGGGATTGTGACCCTTGGAATGCTCTCAGCGTTGGCCTTCTTTTTGTACAAACACAGAGCCAAACACCCGGTGGAGTCTCAAAAACTCGTCGCTGGGAGTGGGAATAACAATAACAATAGCAATATCTCAAACAGAAACGAGGTTGATTCAACTGCGCCACCGTCGAGTTTCCTCTACATTGGGACAGTGGAACCCACGCGAGCCTCTACCAACGACTCGCGAGACAACAGAGATGTTAATAAGGCCAACAGATCGCCGTATCACAAGCTCAAGCGATCCGATCGCTACCGTCCAAGTCCTGAGTTGCAGCCAATGCCGCCGCTCAGTAAGCCTCCCGACGGAAACTACCCGCCGGCGGTCTCCTCCTCATCTGAGTCCGATGAGGAAAGCCGCGGCACGGCGTTTCACTCGCCGCAGAACTCGTCGGTTGATGGATACTATACGCCGGCTTCGCGGCAGAGCTCTCTTGTCAACGGTAGTCCTGCGAAGCGTGACACGAATTCCACGCCCACACCCGTTGTTCCGTTTTCCAAGAGAACTTCGCCCAAGTCACGCCTTTCGGCACCCTCGCCGGAGATACGCCACGTCATCATTCCGTCTATAAAGCAGCCCCCTCCACCGTCGCCGCCGCCACCTAAGCATTCCAGAAAGCCGAAATTTTCGGCGCCTCCCCCACCTCCGAATTTGAAGCATCTTCAGTCAACAACCGACACTGTTTCGCATGTGTCAAAGAGTTTAATCAATCCTCCACCACCACCTCCACCTCCGCCTCCTCCACCGCCGCCGCGAAAATCAGTGTCTCCGGCTGTTAGTGCTTCCTCTAATTCTGCATCTGTAAAGAGGCAGTCTTGGTCACCAATTGAAGGTAGTGTGACGAAAGGTTCAGAAGAGGTTGAACAGAGTGTGAGCTCTTCCGAGAGGCTTGAACCCAATGACAGGGATGGAACCAAACCAAAATTAAAGGCTCTGCATTGGGATAAAGTGCGTGCGACCTCAGACCGTGCTACAGTGTGGGACCAGATAAAATCAAGCTCGTTTCAGTTAAATGAAGACATGATGGAATCGTTGTTTGGATGCAAAGCCACCAATTCTGCCCCGAAAGAGCCTCCCAAAAAATCAGTTCTTCCTTCGGTTGATCATGAGAACAGGGTGTTAGACCCGAAGAAGTCACAGAACATAGCTATACTGCTCAGGGCTTTGAATGTGACCAGAGAGGAGGTGTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGCACTGAGCTATTGGAAACACTAGTAAAGATGGCTCCGACTAAAGAGGAAGAGATAAAGCTTAAAAACTACGATGGTGATCTCTCAAAACTGGGATCTGCAGAAAGGTTTCTTAAAGCAGTGCTTGATATCCCTTTTGCCTTTAAAAGAGTTGAAGCTATGCTATATAGAGCCAACTTTGATTCAGAAATTAACTACCTTAGAAAGTCTTTTCAAACCATGGAGGCTGCAAGTGATGAATTAAAGAACAGCCGCTTATTCCTCAAACTCCTTGAAGCTGTTCTAAGGACGGGAAACAGAATGAATGTTGGCACTAATCGAGGGGATGCTAAAGCTTTCAAACTGGAGACACTCTTGAAACTAGTAGATGTAAAGGGAACAGATGGAAAAACCACATTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAGGAGCTGAATCTGCAAACGAGAATGTGAAAATGGATTCCAAATTTAATGAGGATGAGTTTAAGAAGCAAGGATTGCAAGTTGTGGCAGGACTTAGTAGAGATCTTAGTAATGTAAAAAAGGCAGCTGGAATGGATTCAGATGTCTTGAGCAGCTATCTTTCAAAGCTTGAAACAGGGCTTGATAAAGTGCGATTGGTTTTGCAATATGAAAAGCCAGATGTGCATGGCAATTTCTTTAACTCTACGAAGCTATTTCTAAAATATGCTGAAGATGAAATTGTAAAGATTAAAGCGGATGAGAGAAAAGCTTTGTACCTTGTAAAAGAAGTCACGGAATACTTTCATGGTAATGCAGCAAAGGAAGAAGCCCACCCTCTCAGAATTTTCATGATTGTAAGAGACTTTCTGTGTATTTTGGATCTAGTGTGCAAAGAAGTGGAGAAAATGCATGATAAAATTGTTGGTGGTTCTGGCAGATCTTTCCGAATACCGCCAAGTGCATCATTACCCGTTCTCAATAGGTACAACCATCCAAAGCATGATAGAAGCTCGGACGAGGAAAGTTCATCCCCCTAG 2628 0.4753 MKAPHLSFFYFLTLFLFLSIPVNTAKRVNSSTSANESGTRRILHQPLFPASSAPPPPLPVETPPSPEGGNIPFFHEYPAGPPPDQSQAAPSGSNTSIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPVESQKLVAGSGNNNNNSNISNRNEVDSTAPPSSFLYIGTVEPTRASTNDSRDNRDVNKANRSPYHKLKRSDRYRPSPELQPMPPLSKPPDGNYPPAVSSSSESDEESRGTAFHSPQNSSVDGYYTPASRQSSLVNGSPAKRDTNSTPTPVVPFSKRTSPKSRLSAPSPEIRHVIIPSIKQPPPPSPPPPKHSRKPKFSAPPPPPNLKHLQSTTDTVSHVSKSLINPPPPPPPPPPPPPPRKSVSPAVSASSNSASVKRQSWSPIEGSVTKGSEEVEQSVSSSERLEPNDRDGTKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCKATNSAPKEPPKKSVLPSVDHENRVLDPKKSQNIAILLRALNVTREEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDSEINYLRKSFQTMEAASDELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLETLLKLVDVKGTDGKTTLLHFVVQEIIRSEGAGAESANENVKMDSKFNEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYLSKLETGLDKVRLVLQYEKPDVHGNFFNSTKLFLKYAEDEIVKIKADERKALYLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLCILDLVCKEVEKMHDKIVGGSGRSFRIPPSASLPVLNRYNHPKHDRSSDEESSSP 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02197 875 MobiDBLite consensus disorder prediction 385 417 - -
Viun2g02197 875 MobiDBLite consensus disorder prediction 218 232 - -
Viun2g02197 875 SMART it6_source 428 838 IPR015425 -
Viun2g02197 875 MobiDBLite consensus disorder prediction 188 216 - -
Viun2g02197 875 Pfam Formin Homology 2 Domain 432 822 IPR015425 -
Viun2g02197 875 MobiDBLite consensus disorder prediction 46 109 - -
Viun2g02197 875 MobiDBLite consensus disorder prediction 234 305 - -
Viun2g02197 875 MobiDBLite consensus disorder prediction 318 348 - -
Viun2g02197 875 SUPERFAMILY Formin homology 2 domain (FH2 domain) 369 834 - -
Viun2g02197 875 Gene3D Formin, FH2 domain 422 835 IPR042201 -
Viun2g02197 875 MobiDBLite consensus disorder prediction 852 875 - -
Viun2g02197 875 ProSiteProfiles Formin homology-2 (FH2) domain profile. 428 849 IPR015425 -
Viun2g02197 875 PANTHER FORMIN-RELATED 10 869 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Viun2g02197 875 MobiDBLite consensus disorder prediction 146 437 - -
Viun2g02197 875 MobiDBLite consensus disorder prediction 86 109 - -
Viun2g02197 875 MobiDBLite consensus disorder prediction 349 363 - -
Viun2g02197 875 MobiDBLite consensus disorder prediction 147 187 - -
Viun2g02197 875 MobiDBLite consensus disorder prediction 364 384 - -
Viun2g02197 875 PRINTS Proline rich extensin signature 288 309 - -
Viun2g02197 875 PRINTS Proline rich extensin signature 368 393 - -
Viun2g02197 875 PRINTS Proline rich extensin signature 323 339 - -
Viun2g02197 875 PRINTS Proline rich extensin signature 210 222 - -
Viun2g02197 875 PRINTS Proline rich extensin signature 224 240 - -
Viun2g02197 875 MobiDBLite consensus disorder prediction 418 437 - -
Viun2g02197 875 MobiDBLite consensus disorder prediction 859 875 - -
Viun2g02197 875 MobiDBLite consensus disorder prediction 49 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02197 Viun-Chr2 29803689 29809397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02197 31 865 FH2 protein (formin) Gene Family AT5G67470 57.286 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02197 - - gmx:100798670 1319.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02197 2 29803689 29809397 Viun2g02197 2 29803689 29809397 ECH
Viun2g02197 2 29803689 29809397 Viun3g03932 3 46815127 46820376 PCT