Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02171 ATGGTCTATCTCGCCGGTGCCGGACACAACACAGTCGTCGGAATGGATAATCGGAGGCCAAAATTCTCTACGTCAATTTCTCCGAACAGCATAATTTCAACGCTCTACGACGTCTCTTCTTTGTGTCGGGGTTGCGGAGAACATGACTTCAGTAGCGCTTCTGAATCAGCTTGGACAGATTTTCCCGTAGAGAACGCCTACGAGCTGTTAGGAGTGTCTGAGACCAGTTCCTTTACCGAAATTAAAGCGTCGTTTCGAAAATTGGCCAAAGAAACTCACCCAGACCTCGCTGAGTCAAGCAATGACTCCAGTGCGTCTCGACGATTTGTGCAAATTCTGGCTGCCTACGAGATTCTTTCAGATTCTCAAAAGAGAGCCCATTATGACATGTACCTGTTGTCTCAGAAAAAGCTTATGCAAAAGCATTCTGAACAGGGTTCAAAACTGTATATTTACAAATCACAAGCTACTGCGTTCAAGGAGATGGAAGTTGTTGAATGGTTAAAATGGTACAGATTAACCATAAATAATATCTTGTCAGAAAAGAGGGTGGTAGATGGAACAGGCTATTTTGATGTTCTTGAGAGAGATTTTTATTCAGCTATTCATGCAGCATATTATGGTCCTGAAATTGATTCTATGCCCATGGAATTTCTTCCTGACTGCTTTGAGGCTGAGGAGAGGTCCTCTTATGAAACTCCTGAGGTTTTGCACTTAGTTTCAGGTCGTGATCTTTTCGGAATGGTTTGCCTAGCCAACAAGGTTCCAGAGATATCAACTATTAACAATGAAATGTTAACATCTTTTAGATCCTTCCATTCAGCCTCGTGTCAATCTATAACAAATGTGAATGTCTACAGCAATGCAGAAAGATCAGATGATTTTGAAACCTATCAAGGTCTCAGCCCTAAAACTTCAGGTATTGTATCAGATGCATATAGACATCTTGAATTGCACATCTCTGGAAGAGTTGTTGCTACAGCATCTAGGACCCTACCTAGAAGCTGTTCTGATGTAATGCAGACAGAAGATACCGAAGATCACATTCAAGTGTTCCTTAACTTATACGAAGATCCCAAACATATCATCAGTGATTTTTGGAAAGGTTACCTAGCAAATGGTACAGTTGGAAGAAGAATTCATTTGGGAACTATATCTGGACTTGGGAGCAGTCCAGATGAAGGTTGTTGTTATGTTTACAATGACAAGGGCACAAAGACCCATGCGATTATGAAGCATAGAACATTGATGGTGAAGCATATGCACTGGTATCAGGTGGGTGAGAAAGTTTCAGTTTGCGAGTGTAGATGCACTAGAGCACATTTGCCACCAAGCAAATTTTGGCTGTTTGAGCCTCGCTGTGGTTTCCATGACATAGGGGGTTGGTACGTTGAGACATATGGCAAAGATAAGCACGGTCGTACAAAGCCATCACAAAGGTTTTGGGATGGCTTGGACTATAATATGCAAGCTGACAGAAGACTTCATCCAGCAATGTATTTGTTTGCTCTTGCATATCGGACACTTGATCTTGAATACGCTAAAGCAAGCAAGAAATCATTTAGGCATGTTGTTGGAGCACAAATGTTTCGAGTTATTCATTGGTGCAAGAAACTTGTTCAATAG 1626 0.4164 MVYLAGAGHNTVVGMDNRRPKFSTSISPNSIISTLYDVSSLCRGCGEHDFSSASESAWTDFPVENAYELLGVSETSSFTEIKASFRKLAKETHPDLAESSNDSSASRRFVQILAAYEILSDSQKRAHYDMYLLSQKKLMQKHSEQGSKLYIYKSQATAFKEMEVVEWLKWYRLTINNILSEKRVVDGTGYFDVLERDFYSAIHAAYYGPEIDSMPMEFLPDCFEAEERSSYETPEVLHLVSGRDLFGMVCLANKVPEISTINNEMLTSFRSFHSASCQSITNVNVYSNAERSDDFETYQGLSPKTSGIVSDAYRHLELHISGRVVATASRTLPRSCSDVMQTEDTEDHIQVFLNLYEDPKHIISDFWKGYLANGTVGRRIHLGTISGLGSSPDEGCCYVYNDKGTKTHAIMKHRTLMVKHMHWYQVGEKVSVCECRCTRAHLPPSKFWLFEPRCGFHDIGGWYVETYGKDKHGRTKPSQRFWDGLDYNMQADRRLHPAMYLFALAYRTLDLEYAKASKKSFRHVVGAQMFRVIHWCKKLVQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02171 541 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 46 540 - -
Viun2g02171 541 Gene3D DnaJ domain 56 155 IPR036869 -
Viun2g02171 541 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Viun2g02171 541 Pfam DnaJ domain 65 129 IPR001623 -
Viun2g02171 541 ProSiteProfiles dnaJ domain profile. 65 132 IPR001623 -
Viun2g02171 541 PRINTS DnaJ domain signature 85 100 IPR001623 -
Viun2g02171 541 PRINTS DnaJ domain signature 67 85 IPR001623 -
Viun2g02171 541 PRINTS DnaJ domain signature 104 124 IPR001623 -
Viun2g02171 541 CDD DnaJ 65 121 IPR001623 -
Viun2g02171 541 SMART dnaj_3 64 124 IPR001623 -
Viun2g02171 541 SUPERFAMILY Chaperone J-domain 63 135 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02171 Viun-Chr2 29657027 29662670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02171 67 131 C2H2 Transcription Factor Family AT1G74250 42.647 5.09e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02171 - - vra:106777675 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02171 2 29657027 29662670 Viun2g02171 2 29657027 29662670 ECH