Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02170 ATGTGTGATAAACAAGTTTCTGCAGCTACTTTTGTTTTCTTTGTTATCCTTTGTGATGTATCTCTAGCGGCAATTGAGAGAACAAATGATAATCAAAAGAGTACTTACATTGTTCATGTGACGAAATCTGAAATGCCGACAATCTTAAATCATCATTCAATCTGGTATAGCTCCCTTTTGAAATCGGTATCTAACTCAGCAGAAATGCTCTACACCTATGACAATGCGATTCATGGATTCTCAACAAGATTAACTCCTGAAGAAGCCCGGTCGTTGAAGAGTCAAATCGGGATTCTGAAGGTGCTACCGGAGAAAATATACAAGCCACTCACAACTCGAACACCGCAGTTTCTTGGGCTGGATAAAATCACACACATGTTTCCCGAGTCAAACACGACGAGTGACATCATCATTGGACTCCTCGACACTGGTGTGTGGCCTGAAAGCAAGAGTTTTGATGATGTCGAACTAGGACCCATTCCTAGGAGTTGGAAAGGCAAATGTGAATCAGGTCAGAATTTCAGTGTCGCAAATTGCAATAAAAAACTGATAGGAGCTAGGTTCTTCTTGAAAGGCTTCGAGGCCTCGGTGGTCCCCCTTAATGCAACCACACAGTTTAGATCACCACGAGACTCTGACGGCCATGGCACCCACACTGCAAGCACAGCTGCAGGTTCTGCAGTGAAAGGTGCAAACTTATTTGGGTATGCTTCTGGGATAGCGCGTGGGATGGTCCCACACGCTAGAGTTGCGATCTATAAGGTTTGTTGGGAAGATAACTGTGTTGCTTCTGATATATTAGCGGCAATGGACGCAGCCATCTCTGACAATGTGAATGTCATTTCGGCGTCACTCGGAGGACAAGCAATTGATTACGATGAAGAAAACCTCGCCATTGGAGCCTTTGCAGCAATGGAGAAAGGGATTGTGGTTGCATGTGCTGCAGGAAACGATGGTCCTACCAACTCTACTCTCCAGAATGTAGCACCTTGGATGATCACTGTGGGAGCTGGCACAATAGATCGTGATTTTCCGGTATATGTAAAACTCGGGAATGGACAGAACTATTCTGGAGTTTCAATCAATGATGGTAGTAGTTTTGTGCCTCGTACTTTTGTGCCACTCGTATACGCTGGAAATGCAAGCGTAAAAGTAGGTGCAGAGTTGTGTCTTACAGATAGCTTGGATCCTGAGAAGGTTAAGGGGAAAATTGTGTTCTGCGATCGCGGAAATATTTCAAGGGTGGAGAAAGGGCTTGTGGTGAAATCTGCTGGTGGTGTGGGCATGGTGTTAGCCAATGGAGAGATTGACGGAGAGGAATTGGTGGCGGATGCGCATCTTTTGCCGACAGCTGCAGTGGGTTTCGAAGCCTCCAAAGCCATTAAGATGTACCTGCAACAGACACAAAATCCAACAGCTACACTTGTGTTCGAGGGAACTAAGGTTGGAATTAAACCGTCGCCAATTGTTTCTGCATATAGTGCTCGAGGTCCAAACCCAATCACACCAGAGATATTGAAACCCGATTTCATTGCTCCTGGTACAAACATATTAGCGGCATTTACGAAATTTGCAGGTCCCACAAACCTCGACCAGGATCATAGGCGTGTGGATTTTAACATAATTACAGGAACATCCATGGCATGCCCTCACGCCAGTGGTATAGCAGCTTTGATTAAATCAGTTTATCCAAACTGGAGCCCCGCCGCAATTCGATCTGCGCTTGTAACCACATCTTATGCGTCTTACAAAAATGGTAAAAAAATATTAGACAGTGCCACGAATGCTCCTTCAACACCGTTCGCTGTCGGTGCCGGACATGTGAACCCTATTGCGGCGCTTAATCCAGGACTCGTTTATGATTTAACGGCGGATGATTACCTGAACTTTCTTTGTGCATTGAACTACACATCTGATAGGATTGAAGCTGTGGCGAGGAGAAAGTTCAGGTGTGACGCACAAAAGCACTACAGTGTAACAAGCTTAAATTACCCTTCGTTTGGCGTGGTGTTTAAACCAGTAGTGAGAAGCTCCATTGCAACCGTTATTCACGAGCGAACTCTTACCAAGGTGGGGGTTGCGGGAACATACAAAGCATCAGTTACGTTGGATATCCCTTCTGTGAATATCACAGTTGAGCCAAACGTGTTGAGTTTCAACAAAAATGAGAAAAAATCATACAAGGTGACATTTACAACTCCGAATCCGCCAAAACGAAGGCAGTTTGGTTTTGGACGTTTAGAATGGTCAAATGGAAAAATTATCGTCGGAAGTCCTATCTCAATTATGTGGGAATAA 2298 0.4469 MCDKQVSAATFVFFVILCDVSLAAIERTNDNQKSTYIVHVTKSEMPTILNHHSIWYSSLLKSVSNSAEMLYTYDNAIHGFSTRLTPEEARSLKSQIGILKVLPEKIYKPLTTRTPQFLGLDKITHMFPESNTTSDIIIGLLDTGVWPESKSFDDVELGPIPRSWKGKCESGQNFSVANCNKKLIGARFFLKGFEASVVPLNATTQFRSPRDSDGHGTHTASTAAGSAVKGANLFGYASGIARGMVPHARVAIYKVCWEDNCVASDILAAMDAAISDNVNVISASLGGQAIDYDEENLAIGAFAAMEKGIVVACAAGNDGPTNSTLQNVAPWMITVGAGTIDRDFPVYVKLGNGQNYSGVSINDGSSFVPRTFVPLVYAGNASVKVGAELCLTDSLDPEKVKGKIVFCDRGNISRVEKGLVVKSAGGVGMVLANGEIDGEELVADAHLLPTAAVGFEASKAIKMYLQQTQNPTATLVFEGTKVGIKPSPIVSAYSARGPNPITPEILKPDFIAPGTNILAAFTKFAGPTNLDQDHRRVDFNIITGTSMACPHASGIAALIKSVYPNWSPAAIRSALVTTSYASYKNGKKILDSATNAPSTPFAVGAGHVNPIAALNPGLVYDLTADDYLNFLCALNYTSDRIEAVARRKFRCDAQKHYSVTSLNYPSFGVVFKPVVRSSIATVIHERTLTKVGVAGTYKASVTLDIPSVNITVEPNVLSFNKNEKKSYKVTFTTPNPPKRRQFGFGRLEWSNGKIIVGSPISIMWE 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02170 765 Gene3D - 631 763 - -
Viun2g02170 765 Pfam PA domain 374 461 IPR003137 -
Viun2g02170 765 CDD Peptidases_S8_3 107 580 IPR034197 -
Viun2g02170 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Viun2g02170 765 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252|GO:0006508
Viun2g02170 765 Gene3D Peptidase S8/S53 domain 135 627 IPR036852 GO:0004252|GO:0006508
Viun2g02170 765 ProSiteProfiles Serine proteases, subtilase domain profile. 117 614 - -
Viun2g02170 765 Pfam Fibronectin type-III domain 662 762 IPR041469 -
Viun2g02170 765 FunFam Subtilisin-like protease SBT1.5 135 353 - -
Viun2g02170 765 SUPERFAMILY PA domain 374 440 IPR046450 -
Viun2g02170 765 Gene3D - 341 483 - -
Viun2g02170 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 109 IPR037045 -
Viun2g02170 765 CDD PA_subtilisin_like 347 475 - -
Viun2g02170 765 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Viun2g02170 765 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Viun2g02170 765 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Viun2g02170 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 761 IPR045051 -
Viun2g02170 765 FunFam Subtilisin-like protease SBT1.9 24 110 - -
Viun2g02170 765 Pfam Peptidase inhibitor I9 35 108 IPR010259 -
Viun2g02170 765 FunFam subtilisin-like protease SBT1.5 341 482 - -
Viun2g02170 765 Pfam Subtilase family 134 604 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02170 Viun-Chr2 29652137 29654646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02170 13 764 Subtilisin-like Serine Gene Family AT5G67360 59.814 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02170 - - gmx:100801866 1222.99