Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02139 ATGCCTGTGGAGCTGATGATGGGTTATAGGAACGACACTTTCGCGGAAGAGGATGCGGTTCGTGAAGCCGCGTCAGGGCTAGAGAGCGTGGAGAAGCTCATCAGGTTGCTGTCACACGCTCAGCTCCAACAACTTCAACAACAATCGCACGCGACCAATTCAAAGTCTTCCATGGAAATTGAATCCGATTACGGAGCTGTCGCTGACGTGGCGGTTTCCAAGTTCAAGAAGGTCATTTCGCTTCTCGGCCGAACAAGAACCGGTCACGCGCGTTTCAGAAGAGCCCCTGTGCCTCCTCCTCCTCCTCCTCCTCCACCTCCTTCCGAACCCAGATTCTACCGTGCAACGCCGCTGCAGCAGATCCCGCCCCCCACCGAACACCCTTTCATCCCCAAAAATGGACCGATTGAGACAAAGGACTCTTCCAAGACCATCAACTTCTCTTATTCTAATTCCTTCGTCTCCTCCCTCACCGGCGACACCGACACTAAACAGCCCTCTTCCTCGTCGCCTGCGGCCGCTACGCCTTTTCAGATCACGAATCTCTCTCAGGTCTCCTCCGCGGGAAAGCCTCCTATTTCTACCTCTTCCTTGAAGAGGAAGTGCAGCTCTGATAATTTGGGTTCTGCCAAGTGCGGCAGTTCCTCTAGCCGATGCCATTGCTCAAAGAAGAGAAAAATGAGGTTGAAGAGGGTGGTGAGGGTACCCGCAATAAGTTTGAAGATGGCTGATATTCCGCCAGATGATTATTCTTGGAGGAAATACGGACAGAAACCCATTAAAGGATCTCCTCATCCAAGGGGCTATTACAAGTGCAGCAGTGTTAGAGGGTGTCCAGCGCGGAAGCATGTAGAGAGGGCTCTGGATGACCCTTCTATGTTGGTAGTGACCTATGAAGGTGAACACAATCACACACTCTCTGCAGTCGAAGCTACCACTAATCTTATCCTAGAATCTTCTTAG 963 0.5171 MPVELMMGYRNDTFAEEDAVREAASGLESVEKLIRLLSHAQLQQLQQQSHATNSKSSMEIESDYGAVADVAVSKFKKVISLLGRTRTGHARFRRAPVPPPPPPPPPPSEPRFYRATPLQQIPPPTEHPFIPKNGPIETKDSSKTINFSYSNSFVSSLTGDTDTKQPSSSSPAAATPFQITNLSQVSSAGKPPISTSSLKRKCSSDNLGSAKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHTLSAVEATTNLILESS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02139 320 Pfam WRKY DNA -binding domain 248 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g02139 320 SUPERFAMILY WRKY DNA-binding domain 243 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g02139 320 MobiDBLite consensus disorder prediction 94 112 - -
Viun2g02139 320 FunFam WRKY transcription factor 65 230 307 - -
Viun2g02139 320 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 312 IPR044810 GO:0003700
Viun2g02139 320 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g02139 320 Pfam Plant zinc cluster domain 199 244 IPR018872 -
Viun2g02139 320 MobiDBLite consensus disorder prediction 181 217 - -
Viun2g02139 320 Gene3D WRKY domain 233 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g02139 320 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g02139 320 MobiDBLite consensus disorder prediction 87 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02139 Viun-Chr2 29440163 29442330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02139 1 310 WRKY Transcription Factor Family AT2G24570 44.970 4.56e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun2g02139 WRKY 3.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02139 - - gmx:100804089 476.478