Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g02084 | ATGGGTCTCTGCACTTCCAAACCCACTCTCTCCTCTACCCAATCCGCCACTCACTCCCCCACTCTACCTTCTCAAGACGTAGCCGTCGCAGTCACTCACAGTCACAGCGCTGAACCTCACTTGCACAGCGCCAATGGCGAGAGCGAAAACCCTAAGGAGGTCGACAACGGTAAGAGATCTCCGTTCTTCCCATTTTACAGTCCGAGTCCGGGCCGCTACGTGTTCCCCGTCTCGCCGCGCCGCTTCTTCAAGAGATCGTTTCTGTCGCCCTCGCCGGCGAAACACATAAGGGCGGCGCTGGCGCGGCGGCACGGGTCCGTGAAACCCAACGAGGCTGCCATACCGGAGGCGGAGGCGGTAGCGGGGCTCGACAAGAATTTTGGATTCTCCAAACATTTCGGAAATAAATATGAAGTTGGAGATGAGGTTGGGAGAGGGCATTTTGGATATACTTGTGTTGCTAAGGTGAAGAAAGGAGAGCTGAAGGGACAACAAGTGGCCGTTAAAGTCATTCCAAAAGCCAAGATGACCACTGCAATTGCTATTGAAGATGTGAGAAGGGAGGTAAATATTTTGAGAGCTTTGACTGGGCACAAGAATCTAGTACAATTCTATGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAGTTGTGTGAAGGAGGAGAGCTGTTAGACAGAATATTGTCAAGAGGTGGGAAGTACACAGAGGAAGATGCAAAAGTTGTCCTGAGACAAATACTGAATGTGGTTGCCTTTTGCCATCTTCAGGGCGTCGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTCACATCCAAGGACGAGAACTCAATCCTGAAGACCATAGACTTTGGGTTGTCAGATTTTGTTAAACCAGATGAAAGACTTAATGATATTGTTGGCAGTGCATACTATGTGGCACCCGAAGTTCTTCATAGAGCTTACAGTACCGAAGCTGATGTATGGAGTATTGGAGTGATTGCATATATTTTACTATGTGGCAGTCGTCCCTTTTGGGCCCGGACCGAGTCTGGTATCTTCCATGCTGTGTTAAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTGTCAGATGAGGCAACAAATTTTGTTATGCGATTACTAAATAAAGATCCACGGAAAAGAATGTCTGCAGCACAGGCGTTATGTCATCCATGGATTAAAAACAAGGATGTGAAAGTACCTCTGGATATTCTAATATTCAAGCTCATGAAGGCATACATGCGTTCCTCATCTCTACGGAAAGCGGCTTTAAGGGCTCTGTCCAAGACATTAACTGTGGATGAGCTATTTTATTTGAGGGAGCAGTTTTCACTTTTAGAGCCAAGCAAAAAGGGCTCCATTAACTTGGAAAATATCAAAGCGGTCTTGATGGTGAATGCAACAGATGCTATGAACGAGTCACGCGTACCTGACTTTCTGACATCACTTAATGCATTACAATTTAGAAGGATGGATTTTGATGAGTTCTGTGCGGCTGCCCTTAGTGTTCATCAACTTGAAACACATGACCAGTGGGAGCAACGTGCACGTTATGCTTACGAACTTTTTGAAAAGGACGGTAACAAGGCCATAGTCATTGACGAACTAGCTTCGGAGTTTGGGCTTGGTCCATCTGTCCCTGTTCATGCTGTTCTCCATGATTGGATTCGGCACACTGATGGAAAATTAAGTTTCCTTGGGTTTGTCAAACTGTTGCATGGCCCATCTAGAAGTCTTGCAAAAGCTCAATAG | 1770 | 0.4605 | MGLCTSKPTLSSTQSATHSPTLPSQDVAVAVTHSHSAEPHLHSANGESENPKEVDNGKRSPFFPFYSPSPGRYVFPVSPRRFFKRSFLSPSPAKHIRAALARRHGSVKPNEAAIPEAEAVAGLDKNFGFSKHFGNKYEVGDEVGRGHFGYTCVAKVKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVNILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKVVLRQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSILKTIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFHAVLKADPSFDEPPWPSLSDEATNFVMRLLNKDPRKRMSAAQALCHPWIKNKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTVDELFYLREQFSLLEPSKKGSINLENIKAVLMVNATDAMNESRVPDFLTSLNALQFRRMDFDEFCAAALSVHQLETHDQWEQRARYAYELFEKDGNKAIVIDELASEFGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ | 589 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g02084 | 589 | CDD | STKc_CAMK | 136 | 398 | - | - | |
Viun2g02084 | 589 | FunFam | Calcium-dependent protein kinase SK5 | 309 | 404 | - | - | |
Viun2g02084 | 589 | Gene3D | - | 418 | 507 | - | - | |
Viun2g02084 | 589 | FunFam | CDPK-related kinase 1 | 434 | 507 | - | - | |
Viun2g02084 | 589 | SUPERFAMILY | EF-hand | 426 | 580 | IPR011992 | - | |
Viun2g02084 | 589 | ProSitePatterns | Protein kinases ATP-binding region signature. | 143 | 169 | IPR017441 | GO:0005524 | |
Viun2g02084 | 589 | SMART | serkin_6 | 137 | 399 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g02084 | 589 | FunFam | CDPK-related kinase 3 | 129 | 301 | - | - | |
Viun2g02084 | 589 | ProSiteProfiles | Protein kinase domain profile. | 137 | 399 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g02084 | 589 | Gene3D | Transferase(Phosphotransferase) domain 1 | 226 | 417 | - | - | |
Viun2g02084 | 589 | Pfam | Protein kinase domain | 137 | 399 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g02084 | 589 | Gene3D | Phosphorylase Kinase; domain 1 | 130 | 225 | - | - | |
Viun2g02084 | 589 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Viun2g02084 | 589 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 122 | 564 | - | - | |
Viun2g02084 | 589 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Viun2g02084 | 589 | SUPERFAMILY | Protein kinase-like (PK-like) | 134 | 427 | IPR011009 | - | |
Viun2g02084 | 589 | FunFam | CDPK-related kinase 1 | 130 | 225 | - | - | |
Viun2g02084 | 589 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 261 | 273 | IPR008271 | GO:0004672|GO:0006468 | |
Viun2g02084 | 589 | Gene3D | - | 423 | 577 | - | - | |
Viun2g02084 | 589 | MobiDBLite | consensus disorder prediction | 40 | 56 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g02084 | Viun-Chr2 | 29022192 | 29027524 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g02084 | 1 | 589 | EF-hand Containing Proteins | AT3G50530 | 70.671 | 0.0 | 897 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Viun2g02084 | Pkinase | 2.2e-70 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g02084 | K00924 | - | gmx:100794177 | 1052.74 |