Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02076 ATGAATCTCTATCCTCTTCTTCTTTACATCTTCCTTCGTTATCACCTCAAATCAGGGTATGGTATGGTAGTTTGTGATTTGTGGGAGCATACTGCTCACAGAAAATCACCCAATCCCACTCAGCAACACCCCAGCGCTTTCATGGAGCTCAGCTTGGACTTGAGTTTGGGCTTTGTCCCCAAACCCATTTCCCTCTTCTTCGCCGATGTTTCTGGGAACAGAGACAAGACCGACAAAGTTGCCACGCTCGACGGCTTCGTGCAGAGGTTGGAGGACGAATTGAGGAAAGTTGAGGCCTTCAAACGCGAGCTTCCTCTCTGCATGCTCCTCCTAAACGATGCTATCGCCAGATTGAAAGAGGAAAAAGTAAAGTGTTCAGTATTGCAAGATCTGCCTACCAGTGAACAGTTTGTGCCACCGAAAACCACTTCTGGGGAAAGCGAAAATGAAAAATGTGAGAAGAAGAATTGGATGAGTTCAGCTCAGCTTTGGAGCACTCAGAAAATCAAATCGAGGAATGAAGAAGGTGATAGGTCTGTGCCAGAGAACCCAATTAATGCGAATTTGTGTGCCCCGAGGAAGGAGGGTTCACAAATTCCGAGTTTTAGTTTGATGGGTCACGCCTCTGAACTGAGTCATAGCAATTCCAAGAGTGTATGTGGAGATACCAGTTCTGGCTCTTCTTTGCTCCGTGTTGAGGTACAGAGCCAGCCCCAACCGCCGCAACACATGCAGCAGAATCCAAGGAAACAGAGGCGGTGCTGGTCACCGGAGCTGCACCGGCGTTTTGTGGATGCCCTTCAACAACTTGGTGGAGCACAAGTGGCCACCCCTAAACAGATTAGAGAACTGATGCAGGTGGAGAGCCTGACAAATGATGAAGTGAAAAGCCATTTACAAAAATACAGGCTTCATGTTAGGAGATTCCCAGTTTCATCAGTTGGGCAAGCTGATAATGGGTCATGGATGGGCCAAGATCAATGTGGGGATAAATCAAAGGGAAACTTGTCACAGTCTGGTTCTCCTCAAGGTCCTCTCACACCTCTCCTTCTAGGAGGAGGAGGTTCTGCTAAGGGTATCTCAAGCCCTGGACGGAACAGTGTGGATGCAGAAGATGAGCAATCAGATTGCAGGAATTGGAAAGGAGGACTCCACCAGCACCTTGAAGCTGATAACCACAGCCTCTAA 1188 0.4815 MNLYPLLLYIFLRYHLKSGYGMVVCDLWEHTAHRKSPNPTQQHPSAFMELSLDLSLGFVPKPISLFFADVSGNRDKTDKVATLDGFVQRLEDELRKVEAFKRELPLCMLLLNDAIARLKEEKVKCSVLQDLPTSEQFVPPKTTSGESENEKCEKKNWMSSAQLWSTQKIKSRNEEGDRSVPENPINANLCAPRKEGSQIPSFSLMGHASELSHSNSKSVCGDTSSGSSLLRVEVQSQPQPPQHMQQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVESLTNDEVKSHLQKYRLHVRRFPVSSVGQADNGSWMGQDQCGDKSKGNLSQSGSPQGPLTPLLLGGGGSAKGISSPGRNSVDAEDEQSDCRNWKGGLHQHLEADNHSL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02076 395 MobiDBLite consensus disorder prediction 234 253 - -
Viun2g02076 395 Pfam Myb-like DNA-binding domain 252 303 IPR001005 -
Viun2g02076 395 Gene3D - 249 306 - -
Viun2g02076 395 SUPERFAMILY Homeodomain-like 248 308 IPR009057 -
Viun2g02076 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 247 307 IPR017930 -
Viun2g02076 395 Coils Coil 83 103 - -
Viun2g02076 395 MobiDBLite consensus disorder prediction 314 395 - -
Viun2g02076 395 MobiDBLite consensus disorder prediction 369 395 - -
Viun2g02076 395 FunFam Myb family transcription factor 249 307 - -
Viun2g02076 395 MobiDBLite consensus disorder prediction 234 252 - -
Viun2g02076 395 MobiDBLite consensus disorder prediction 135 193 - -
Viun2g02076 395 MobiDBLite consensus disorder prediction 314 345 - -
Viun2g02076 395 NCBIfam myb-like DNA-binding domain, SHAQKYF class 250 305 IPR006447 GO:0003677
Viun2g02076 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 55 380 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02076 Viun-Chr2 28976695 28978986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02076 48 300 G2-like Transcription Factor Family AT4G37180 42.751 9.67e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun2g02076 Myb_DNA-binding 2.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02076 - - pvu:PHAVU_002G021400g 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03781 3 44982511 44984940 Viun2g02076 2 28976695 28978986 PCT