Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02071 ATGGCAGATCTGTTCGAGGGAGGTGCTGTGGGAGCACTGATGGGAGAGGTGTTGAAAGGGGCTATTTCAACCATAAAAAAGGGTCTAGCCTTCGAACCCACCCTCGAGAGCAACATAGAAACCTTAAACTCTTTGGCTCCTCTGGTGGAGGAGATAAAGAAGTACAACATGTTGTTGGATCGGCCCAGAGAGGAGATAGAGCGGTTGGAGAGTCACATGCGAGCTGGTGAAGAGCTTGTTCGGAAGTGTTCGAAATTGGGCCGGTGGAGAATGTGGTCGTTCCCTTATTACCAGAGCAAGCTTCAGAGCAAGGACGGGGCTCTCCAGAAGCACTTATCGGTGAACGTGTCGGTGCAGAACAGGAGGGACTTGATGGAGGTGGTGGACGGCATGAGGAAGGTTTTGGAGATTCTGCTAAATGGGGAATTCGGGCGTTATTCTGGGTACCAGTTGATGGGTCTGTGTGGGGCTCCTCAAGAACCCGCGTGCATGGGAATGGAGGTGCCTTTAAGCAAGCTGAGGATTGAGTTGCTCAAGGATTCTGTGTCTGTTCTTGTCTTGACTGGTTTGGGAGGGTCAGGGAAAAGCACACTGGCTAAGAAGATATGTTGGGACCCTCAAGTCATAGGCAAGTTCGGGAAAAACATCTTCTTTGTCACTGTATCAAAAACTCCCAACTTGAAGACCATTGTAGAGACACTGTTTGAACACTGTGGTTGTCGGGTGCCGAAGTTTCAAACCGATGAAGATGTAGTAAATCGACTGGAAGTTCTGCTGAGGGTTCTTGGGAAACATCCAATATTGTTGGTCTTGGATGATGTTTGGCCTGGCTCAGAAGACCTTGTTGAAAAGTTTAAAATTAAGATACCTGATTACAAGATTTTGGTTACTTCAAGGGTTTCATTTCCACGATTTGGCACCTCGTACCAGTTGGATAAACTTGATCATGTCCATGCAGAATCCCTTTTCCGTCACATTGCCCTGAAAGACAAAAGCTCATACATACCTGAAAAAAATCTTGTCGACGAGATAGTGAAAGGTTGCAAGGGTTCACCATTGGCACTTAAGGTGATTGCTGGATCGCTCTGTAACCAGCCTTTTGAGGTGTGGCAAAATATGAAGGAGCGTTTACAAAGGGAATCCATTCTGGAGTCTGATACTGATTTGCTTTTTCGTCTTCAACAAAGTTTAGATATATTGGAGACTAAGTTCTCCATCAATGAAAAGGAGTGTTTCATGGATCTGGGGCTATTTCCTGAAGATCAAAGAATCCCTGTAGCTGCTCTCATTGATATGTGGGCAGAACTGTATAACCTTAATGAAGATGGTAGCAATGCAATGTCCATTATCCATGATTTAATCACCAGGAATTTGATTAATGTTATAGTTACAAGGAAAGTTGCAAAGGATACAGACATGTACTACAATAACCATTTTGTTTTGGTGCATGATCTACTTAGAGAGCTAGCTATACATCTAAGCAAAGAGAAAACATTTGAACAGAGAGAAAGAGTGATGATTGAATTAAATGGAGATAATCGTCCTGAATGGTGGGTGAGACTGAATCCGCTAGGAATCATTGGCCGTTCGTTCTCATACATCCTGGGAATGTTGTATACACAGAAACAACCAAAGGTTGCTGCTCGCATATTGTCTATTTCAACTGATGAAACGTTTACTTCGGATTGGTGTGACATGCAACCTGACGAAGCCGAGGTTCTGGTTTTAAATCTTCTCTCTAGCCAGTACTCATTGCCAGAGTTCACAGAGAAGATGCATAAACTGAAAGTTCTGATTGTCACAAATTATGGTTTCCATCGTTCTGAACTAAACATGTTTGAGCGACTTGGTTCTTTAACTAACTTGAAAAGAATCAGATTGGAAAAGGTTTCAATCCCTCCCCTGTGCATATTGAAGAATCTGCGAAAATTGTCCATTCATATGTGTAATACATGCCATGCTTTTGATACATATTCTATCTCAGATGCAATGCCAAATCTTGTGGAGATGAGCATTGATTATTGCAAAGATCTGGTTAAATTTCCTGATGGGCTGTGTAACATCACCCCATTGAAGAAGCTTAGTATCACTAACTGTCACAGCCTTTCTGCACTGCCACAAGATCTTGCAAAGCTGGAGAATTTGGAAGTTCTAAGGCTATGTTCCTGCTCTGATTTGGTAGGGATGCCAGATTCTGTTAAAGGGCTTGACAAACTTAGCTGTCTCGATATCTCAGACTGTTTAAATCTCACCAAATTACCAGATGACATTGGTGAGTTGAAGCTTGAGAAGCTCTACTTGAAGGGTTGCTCACAACTGAGAGAACTGCCACACTCGGTCGTTAAGTTTGAAAATTTAAAGCATAAAATACATGTGATCTGTGATGAAGAAATGGTGGCTTCTTTATGGGAAAATCTTACCATTCGCAATTTGAAGATAGAGATATCTACAGTGGAGGTTAACTTAAATTGGCTTCCTGGAGTTCATTCCTGA 2493 0.4264 MADLFEGGAVGALMGEVLKGAISTIKKGLAFEPTLESNIETLNSLAPLVEEIKKYNMLLDRPREEIERLESHMRAGEELVRKCSKLGRWRMWSFPYYQSKLQSKDGALQKHLSVNVSVQNRRDLMEVVDGMRKVLEILLNGEFGRYSGYQLMGLCGAPQEPACMGMEVPLSKLRIELLKDSVSVLVLTGLGGSGKSTLAKKICWDPQVIGKFGKNIFFVTVSKTPNLKTIVETLFEHCGCRVPKFQTDEDVVNRLEVLLRVLGKHPILLVLDDVWPGSEDLVEKFKIKIPDYKILVTSRVSFPRFGTSYQLDKLDHVHAESLFRHIALKDKSSYIPEKNLVDEIVKGCKGSPLALKVIAGSLCNQPFEVWQNMKERLQRESILESDTDLLFRLQQSLDILETKFSINEKECFMDLGLFPEDQRIPVAALIDMWAELYNLNEDGSNAMSIIHDLITRNLINVIVTRKVAKDTDMYYNNHFVLVHDLLRELAIHLSKEKTFEQRERVMIELNGDNRPEWWVRLNPLGIIGRSFSYILGMLYTQKQPKVAARILSISTDETFTSDWCDMQPDEAEVLVLNLLSSQYSLPEFTEKMHKLKVLIVTNYGFHRSELNMFERLGSLTNLKRIRLEKVSIPPLCILKNLRKLSIHMCNTCHAFDTYSISDAMPNLVEMSIDYCKDLVKFPDGLCNITPLKKLSITNCHSLSALPQDLAKLENLEVLRLCSCSDLVGMPDSVKGLDKLSCLDISDCLNLTKLPDDIGELKLEKLYLKGCSQLRELPHSVVKFENLKHKIHVICDEEMVASLWENLTIRNLKIEISTVEVNLNWLPGVHS 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02071 830 SUPERFAMILY RNI-like 582 788 - -
Viun2g02071 830 PRINTS Disease resistance protein signature 710 726 - -
Viun2g02071 830 PRINTS Disease resistance protein signature 261 275 - -
Viun2g02071 830 PRINTS Disease resistance protein signature 184 199 - -
Viun2g02071 830 PRINTS Disease resistance protein signature 348 362 - -
Viun2g02071 830 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Viun2g02071 830 Gene3D - 155 302 IPR027417 -
Viun2g02071 830 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 133 IPR008808 -
Viun2g02071 830 Gene3D - 313 392 IPR042197 -
Viun2g02071 830 Gene3D Ribonuclease Inhibitor 542 799 IPR032675 -
Viun2g02071 830 Pfam NB-ARC domain 171 383 IPR002182 GO:0043531
Viun2g02071 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 415 IPR027417 -
Viun2g02071 830 Gene3D - 393 492 IPR036388 -
Viun2g02071 830 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 825 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02071 Viun-Chr2 28947105 28951540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02071 663 786 Receptor kinase-like Gene Family AT1G29740 29.600 3.26e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02071 - - gmx:100792590 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02071 2 28947105 28951540 Viun3g03775 3 44934240 44938742 PCT