Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02063 ATGTCATTTTCGTTGTTCGCCACGCCGCAGCAGCAACAGCAACCGCAGCAGTCTCCTTTTCAACCACAGCAAACTAGTTTGTTCCTTACGCAGCAGCAGCAGCATCAGCAGCATCAGCAGCAGCAGTTTCAACCACAACAGCAGCAGCCGCAGCAGCCGCAACAGCAGTTGTTTTTGTTCACTAACGATAAAACACCCGCTAGTTATAGTACCAATTGGGCGGATCTACATCCTGACTCCCAGAAGATTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCCGTTTCCAACGATGGCTTTGAGCTTGACGCGGGCCATATTGTTCAGGAACTTGGTGGAATTAGCACTGGCATGGAGCGACAAAAAGCTTTGCTGCAGGAACTGATGTCCACTGTTAAGGAAATGCTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGTTACTACGCCCCAGGTTCCTTCATCCCAGTGGGGGTTCATCAAGTGCCACTGCCCCATCACAGACTCCTGGAGCGACTATAGCACCTGGCTCAAGTGGCCAACCGATAAATGCATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCGCCATTTTTACAGCAAACAATTTTAAGATTTGAGAAGTATCTTGGCGAGTGCCATCAGTGGATTGAAGAGTTGGAGCAGCTGCTTCTTTTGGACTCTGAGAGAAATGCTTCCAGTAACGGATCCTCATTACTGCAATCTCTTCCCAAGGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCGAAGGTGGAGAGCATTCATCAGTACATTGAATCTATGAAATCATCATACCTAGCTGATCAGCGTCGCCGGGGGGAGGTGAATGACCCGTTTTTGGAGGCAGATCGGCGAGAAACTGCAAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATCCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGGACTCAAGCAGCATTGCCTGCCCCACAGACATCTGCAGCAACTACATCTTTGTCATCAGGAAGTGGATTCTCTCTTTTTAGTACACCATCCTCTGCTCCATCGTCTTCTGCGTTGTCATCTCTATTTACAACACCAACTCCTGCCCCAGGACCTCAAACCTCACTTTTTGGTTCTGCAACATCTGTACCTGGAGTGGCATCAACTCCCTCTCTGTTCGGTAATACCACTCCATTGTTTAGTTCAACCCCAGCTACAAATACACTCTTTTCAACTCCATTTGGTTCAGGCGCTGCAACAGGATCTGGGGCTAGCTTTGGACCTGGATCGAAAAATCCACGGGCGAAATCAAGAACTGCTCGACGCTGA 1428 0.4762 MSFSLFATPQQQQQPQQSPFQPQQTSLFLTQQQQHQQHQQQQFQPQQQQPQQPQQQLFLFTNDKTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGISTGMERQKALLQELMSTVKEMLRNTEVAVRSFMLLRPRFLHPSGGSSSATAPSQTPGATIAPGSSGQPINASIVPVFDFYSGLPKKPSPFLQQTILRFEKYLGECHQWIEELEQLLLLDSERNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSSYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANPQPSTQVAGLFSSSGTQAALPAPQTSAATTSLSSGSGFSLFSTPSSAPSSSALSSLFTTPTPAPGPQTSLFGSATSVPGVASTPSLFGNTTPLFSSTPATNTLFSTPFGSGAATGSGASFGPGSKNPRAKSRTARR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02063 475 MobiDBLite consensus disorder prediction 337 415 - -
Viun2g02063 475 MobiDBLite consensus disorder prediction 443 475 - -
Viun2g02063 475 Coils Coil 135 155 - -
Viun2g02063 475 MobiDBLite consensus disorder prediction 1 54 - -
Viun2g02063 475 Gene3D - 217 307 - -
Viun2g02063 475 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 461 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Viun2g02063 475 MobiDBLite consensus disorder prediction 310 329 - -
Viun2g02063 475 SUPERFAMILY beta-sandwich domain of Sec23/24 8 72 - -
Viun2g02063 475 MobiDBLite consensus disorder prediction 310 415 - -
Viun2g02063 475 MobiDBLite consensus disorder prediction 443 460 - -
Viun2g02063 475 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02063 Viun-Chr2 28883883 28888336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02063 57 475 NAC Transcription Factor Family AT4G37130 64.419 1.44e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02063 K14307 - gmx:100776992 700.664