Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02062 ATGTCATTTTCGTTGTTCGCCACGCCGCAGCAGCAACAGCAACCGCAGCAGTCTCCTTTTCAACCACAGCAAACTAGTTTGTTCCTTACGCAGCAGCAGCAGCATCAGCAGCATCAGCAGCAGCAGTTTCAACCACAACAGCAGCAGCCGCAGCAGCCGCAACAGCAGTTGTTTTTGTTCACTAACGATAAAACACCCGCTAGTTATAGTACCAATTGGGCGGATCTACATCCTGACTCCCAGAAGATTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCCGTTTCCAACGATGGCTTTGAGCTTGACGCGGGCCATATTGTTCAGGAACTTGGTGGAATTAGCACTGGCATGGAGCGACAAAAAGCTTTGCTGCAGGAACTGATGTCCACTGTTAAGGAAATGCTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGTTACTACGCCCCAGGTTCCTTCATCCCAGTGGGGGTTCATCAAGTGCCACTGCCCCATCACAGACTCCTGGAGCGACTATAGCACCTGGCTCAAGTGGCCAACCGATAAATGCATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCGCCATTTTTACAGCAAACAATTTTAAGATTTGAGAAGTATCTTGGCGAGTGCCATCAGTGGATTGAAGAGTTGGAGCAGCTGCTTCTTTTGGACTCTGAGAGAAATGCTTCCAGTAACGGATCCTCATTACTGCAATCTCTTCCCAAGGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCGAAGGTGGAGAGCATTCATCAGTACATTGAATCTATGAAATCATCATACCTAGCTGATCAGCGTCGCCGGGGGGAGGTGAATGACCCGTTTTTGGAGGCAGATCGGCGAGAAACTGCAAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATCCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGGACTCAAGCAGCATTGCCTGCCCCACAGACATCTGCAGCAACTACATCTTTGTCATCAGGAAGTGGATTCTCTCTTTTTAGTACACCATCCTCTGCTCCATCGTCTTCTGCGTTGTCATCTCTATTTACAACACCAACTCCTGCCCCAGGACCTCAAACCTCACTTTTTGGTTCTGCAACATCTGTACCTGGAGTGGCATCAACTCCCTCTCTGTTCGGTAATACCACTCCATTGTTTAGTTCAACCCCAGCTACAAATACACTCTTTTCAACTCCATTTGGTTCAGGCGCTGCAACAGGATCTGGGGCTAGCTTTGGACCTGGATCGGTAAAATAA 1398 0.4735 MSFSLFATPQQQQQPQQSPFQPQQTSLFLTQQQQHQQHQQQQFQPQQQQPQQPQQQLFLFTNDKTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGISTGMERQKALLQELMSTVKEMLRNTEVAVRSFMLLRPRFLHPSGGSSSATAPSQTPGATIAPGSSGQPINASIVPVFDFYSGLPKKPSPFLQQTILRFEKYLGECHQWIEELEQLLLLDSERNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSSYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANPQPSTQVAGLFSSSGTQAALPAPQTSAATTSLSSGSGFSLFSTPSSAPSSSALSSLFTTPTPAPGPQTSLFGSATSVPGVASTPSLFGNTTPLFSSTPATNTLFSTPFGSGAATGSGASFGPGSVK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02062 465 Gene3D - 217 307 - -
Viun2g02062 465 MobiDBLite consensus disorder prediction 310 348 - -
Viun2g02062 465 Coils Coil 135 155 - -
Viun2g02062 465 MobiDBLite consensus disorder prediction 390 414 - -
Viun2g02062 465 MobiDBLite consensus disorder prediction 1 54 - -
Viun2g02062 465 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 446 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Viun2g02062 465 MobiDBLite consensus disorder prediction 310 329 - -
Viun2g02062 465 SUPERFAMILY beta-sandwich domain of Sec23/24 8 72 - -
Viun2g02062 465 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02062 Viun-Chr2 28883880 28888336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02062 57 460 NAC Transcription Factor Family AT4G37130 64.819 8.45e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02062 K14307 - gmx:100776992 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02062 2 28883880 28888336 Viun2g02062 2 28883880 28888336 ECH