Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02038 ATGGAAGTGCTTTGTTCTGGTGTTCAATATGCTGGGGAATCTGATTGCACTCAGCAGAGTTCAGGAACTGCTTTTGTATATCAGGAAGAACCTAATTGTGCCGAAAATGGTGAACAAGACAAATTGGTAGCTGCTAGACTGAATGAATCATCACATAAAATGCAAGGGCCTCAAATAGAAAGGCAAGGTGGTTTGTCAACTAATTCAGATTGCCAATGCATTGGAGCTTCATGTTGTGACTGTCAAGTGGATGATCAAAATGAATACTGTGGTTTCCATGATTTTGAAGAAGACATTATAAATGAACCTTGTTTAACATCTGACAACTCTATCTCTGTTGTTGATACAATTGAAAGTGAATCACCAAATAACAGTCGGGAAGGAGACTTGTCATGTTCTGAACCCAAGTGGCTTGAGGGGGATGGATCAGTGGCATTGTGGGTCAAGTGGAGGGGGAAGTGGCAGGCTGGTATCCGGTGTGCAAGGGCTGACTGGCCGTTATCAACGTTGAAAGCAAAACCAACACATGAAAGAAAGAAATATTTTGTTATATTCTTTCCACACACAAGGATTTATTCTTGGGCAGACATGCTACTCGTTAGATCAATTAATGAGTTTCCCCATCCCATTGCATATAAGACTCATCAGGTGGGACTGAAAATGGTTAAAGACTTAACTGTTGCACGGCGGTTTATTATGCGAAAGCTAGTTGTTGGCATGCTGAACATGGTCGACCAGTTTCCTTTTAATGCTTTGACAGAAACTGCTCGTGATATGAAGGTCTGGAAGGAGTTTGCCATGGAGGCTTCTCGTTGTAATGATTATTCTGATTTTGGAAGAATGCTTCTAAAGCTGCATAGTAGCATACTACAGCACCATATAAATGTTGACTGGTTACGGTATTCTTATCCCTCTTGGACTGAAAGATGTCAGAGTGCAAATAGTGCTGACTCAGTGGAGCTACTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGGGATCAATACTCTCTCTGATACACCAGTGCAATCGACATTAAGTTCTGAATGGAAAACCTGGAAGCATGATGTAATGAAATGGTTTACGACGCCACCTTCCTTATCGATCAGCAAAGACACACAGCAACAGAGTTCTGATGATTTGTTTCGAGCAAACCTTCAGGTTTGTAGAAAAAGGGCCAAACTTGAAGTTCGTCGTGCAGATACACATGCTTCACAAGTGGAAATCAAGGCTCAAACTGTTGCTCTTCAGGCTGACCCTGGCTTTTTCACGAATCAGGGCATATTGAGCACATTAGCAGCCGAGTCTTGCAAACAGGTAGGTGTTAGGGAGGTGTCTATGGCAGTTGATTCACCTGGTCATTTGGTCGATAAATGGAATGAAATTGTAGTTGAGAATACTGATCCCCATTTTTTGCATACCAAACATATGGAATCAACACCTACGAAGGAAATGACTATTGCGAAATCTGTAGAATCTGGTAGTAAGAATCGACAATGTATAGCTTATATTGAAGCAAAGGGTAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTGTACTGTTGTGTACATTTATCTTCCCGATTTTTGGGCAGCTCAACGAAATCTGAAAAGCCTGTTCCACTTGATACTCCTATGTGTGAAGGCACTACTGTTCTGGGTACTAGATGTAAGCATCGTGCCCTACCTGGCTCTTTATTCTGTAAGAAACACCGGCCACATGCTGAAACAGAGCAGATCTCAAATATACCGCAGAATACATTAAAGAGAAAACATGAAGAAAATTATACTGGTTCAGAGGGCATTCTCTCCAGAGACTTGGTATTAGTCAATGTTGAAAGTCCACTGCAAATGGATCCATTGTCATCCATTGGTGGTGATTCCAAACATGGAGAAAACAACTCTAATGAGAAGCCCATGCATTCTGAACATGAACATAATGCAATGGAGTCACTGCAGTGTATAGGTTCCCCTCCCTATGATAAGATGAATCCTTGTAAGGAAGGTACTAAACGGTATTGCTTGTACTGCGAAAGTCACCTTCCTAGTTGGCTTAAGCGTGCAAGAAATGGGAAGAGTAGAATAGTATCGAAAGAAGTGTTCACAGAACTTTTGAGGGACTGCAACTCATGGGAGCAAAAGGTACATCTGCATAAAGCATGTGAACTTTTTTACAGGCTTCTTAAAAGCATTTTATCATTAAGAAACCCTGTTCCTAAGGATGTCCAGTTTCAGTGGGCTCTGACTGAAGCCTCTAAAGATTCTAGTGTAGGAGAGTTTTTTAAAAAGTTAGTTCACAGTGAAAAGGCCAGAATCAAATCATTATGGGGATTCAATGATGACATGGATATATCTTCTGTCATGGAAGAACCACCTCTCTTGCCATCCCCACACAATGATCACTATGATAAGGAAAATGCCATTAAGTGTAAGCTATGCTCTGCAGAATTTCCTGATGACCAAGAGCTTGGTAACCATTGGATGGACAGTCATAAAAAGGAGGCACAGTGGCTGTTTAGAGGCTATGCATGTGCCATTTGTCTGGATTCATTTACTAACAAGAAACTGTTGGAAACGCATGTTCAGGAGAGACACCATGTGCAATTTGTTGAACAATGCATGCTTCTCCAATGCATCCCTTGTGGGAGTCATTTTGGAAATACCGAACAATTATGGCAGCATGTTTTATCAGTTCATCCTATTGATTTTAAACCATCAAAAGCTCTTGAGCAGCAAACTTTATCAACTGGTGAAGATTCTCCAGTAAAACGTGATCAGGGTAATTCAGCCCCTTTGGAAAATAATTCTGAGAATACAAGCGGTTTTCGGAAATTTGTTTGCAGGTTTTGTGGGTTGAAATTTGATTTACTACCTGACCTAGGTCGACATCACCAAGCTGCTCATATGGGGCCTAATCTGGCCAGTAGTCGCCCTGCAAAGAGGGGAGTTCGATATTATGCTTACAGATTAAAATCAGGCAGACTTAGCCGCCCCAGATTTAAAAAAAGTTTGGCAGCAGCATCATACAGGCTTAGAAATAAGGCTAATGCTAATTTAAAGCGAAGCATTCAGGAAACAAATTCACATGGCACAGGGGGAATAACCATACAACCTCATGTTACTGAATCAACAAACATTGGTAGATTGGCGGAACATCAATGCTCAGCTGTTTCAAAGATTTTGTTTTCAGAGATTCAAAAGACAAAACCCCGTCCAAACCATCTTGATATTTTATCAATTGCTCGCTCTGCTTGCTGCAAAGTTAGTCTTGTAGCATCATTGGAGGAGAAATATGGAATTCTTCCTGAAAAGCTCTATTTGAAGGCAGCAAAACTTTGCAGTGAGCATAATATTTTGGTAAGTTGGCATCAGGAGGGTTTTATTTGTCCTAGTGGGTGTAATGTATCAAAGGCTCAAGTTTTGCTCTCTCCTATAGAGTCTCTTCCTAATAGTTCTGTAATGCCCAAAGCGGGTAATTTATCTGATCCTACAAGTGATGAGTGGGATGTGGATGAATTTCACTGCATCATCAATTCACGAACTTTAAAGTTAGGTTCACTGCAAAAAGCTGTGGTCTTGTGTGATGACATTAGCTTTGGGAAGGAATCAATTCCAGTGATTTGTGTAGTAGATCAAGAACTTGTGCATTCACTTCATATCAATGGCTGCAATGGACAAAATATAAACCCTTCTAGACCTTGGGAGAGCTTTACCTATGTTACAAAGCCAATGCTCGATCAATCCCTCATTCTTGATTCAGAGAGTCTGCAACTGGGATGTGCCTGTTCATACACCACCTGCTGTCCTGAAACATGTGATCATGTATACCTTTTTGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATCATCCTGGAGGAAGGTTATCTTGTCTATGAGTGTAATCACATGTGCAGATGCAATAAATCCTGTCCAAATAGAGTATTGCAGAATGGTGTACGAGTCAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGTGAAGCTATTCTACGTGGCACATTTGTGTGTGAATACATTGGAGAAGTTTTAGATGTGAAAGAGGCACATGATAGGCGTAGAAGTTATGGCACAGAGCACTGCAGTTATTTCTATGACATCGATGCTCGTGTTAATGATATGAGCAGATTGATTGAAGGACAGGCTCAGTATGTAATTGATGCTACTAAATTTGGAAATGTTTCAAGATTCATCAATCATAGGTGA 4293 0.4083 MEVLCSGVQYAGESDCTQQSSGTAFVYQEEPNCAENGEQDKLVAARLNESSHKMQGPQIERQGGLSTNSDCQCIGASCCDCQVDDQNEYCGFHDFEEDIINEPCLTSDNSISVVDTIESESPNNSREGDLSCSEPKWLEGDGSVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHERKKYFVIFFPHTRIYSWADMLLVRSINEFPHPIAYKTHQVGLKMVKDLTVARRFIMRKLVVGMLNMVDQFPFNALTETARDMKVWKEFAMEASRCNDYSDFGRMLLKLHSSILQHHINVDWLRYSYPSWTERCQSANSADSVELLKEELFDSILWNGINTLSDTPVQSTLSSEWKTWKHDVMKWFTTPPSLSISKDTQQQSSDDLFRANLQVCRKRAKLEVRRADTHASQVEIKAQTVALQADPGFFTNQGILSTLAAESCKQVGVREVSMAVDSPGHLVDKWNEIVVENTDPHFLHTKHMESTPTKEMTIAKSVESGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSTKSEKPVPLDTPMCEGTTVLGTRCKHRALPGSLFCKKHRPHAETEQISNIPQNTLKRKHEENYTGSEGILSRDLVLVNVESPLQMDPLSSIGGDSKHGENNSNEKPMHSEHEHNAMESLQCIGSPPYDKMNPCKEGTKRYCLYCESHLPSWLKRARNGKSRIVSKEVFTELLRDCNSWEQKVHLHKACELFYRLLKSILSLRNPVPKDVQFQWALTEASKDSSVGEFFKKLVHSEKARIKSLWGFNDDMDISSVMEEPPLLPSPHNDHYDKENAIKCKLCSAEFPDDQELGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNTEQLWQHVLSVHPIDFKPSKALEQQTLSTGEDSPVKRDQGNSAPLENNSENTSGFRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLASSRPAKRGVRYYAYRLKSGRLSRPRFKKSLAAASYRLRNKANANLKRSIQETNSHGTGGITIQPHVTESTNIGRLAEHQCSAVSKILFSEIQKTKPRPNHLDILSIARSACCKVSLVASLEEKYGILPEKLYLKAAKLCSEHNILVSWHQEGFICPSGCNVSKAQVLLSPIESLPNSSVMPKAGNLSDPTSDEWDVDEFHCIINSRTLKLGSLQKAVVLCDDISFGKESIPVICVVDQELVHSLHINGCNGQNINPSRPWESFTYVTKPMLDQSLILDSESLQLGCACSYTTCCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVYECNHMCRCNKSCPNRVLQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVKEAHDRRRSYGTEHCSYFYDIDARVNDMSRLIEGQAQYVIDATKFGNVSRFINHR 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02038 1430 ProSiteProfiles Zinc finger C2H2 type domain profile. 844 867 IPR013087 -
Viun2g02038 1430 MobiDBLite consensus disorder prediction 621 648 - -
Viun2g02038 1430 SUPERFAMILY SET domain 1188 1429 IPR046341 -
Viun2g02038 1430 SMART c2h2final6 947 970 IPR013087 -
Viun2g02038 1430 SMART c2h2final6 878 901 IPR013087 -
Viun2g02038 1430 SMART c2h2final6 844 867 IPR013087 -
Viun2g02038 1430 SMART c2h2final6 810 833 IPR013087 -
Viun2g02038 1430 MobiDBLite consensus disorder prediction 633 648 - -
Viun2g02038 1430 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 5 1429 - -
Viun2g02038 1430 Pfam SET domain 1350 1429 IPR001214 GO:0005515
Viun2g02038 1430 Gene3D Classic Zinc Finger 810 868 - -
Viun2g02038 1430 MobiDBLite consensus disorder prediction 914 939 - -
Viun2g02038 1430 Gene3D SET domain 1178 1430 IPR046341 -
Viun2g02038 1430 SMART preset_2 1196 1323 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun2g02038 1430 ProSitePatterns Zinc finger C2H2 type domain signature. 812 833 IPR013087 -
Viun2g02038 1430 ProSitePatterns Zinc finger C2H2 type domain signature. 880 901 IPR013087 -
Viun2g02038 1430 ProSiteProfiles Pre-SET domain profile. 1260 1336 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun2g02038 1430 Pfam Zinc finger C2H2-type, 3 repeats 846 971 IPR040689 -
Viun2g02038 1430 ProSitePatterns Zinc finger C2H2 type domain signature. 949 970 IPR013087 -
Viun2g02038 1430 ProSiteProfiles Zinc finger C2H2 type domain profile. 947 975 IPR013087 -
Viun2g02038 1430 ProSiteProfiles SET domain profile. 1339 1430 IPR001214 GO:0005515
Viun2g02038 1430 Pfam Pre-SET motif 1200 1331 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02038 Viun-Chr2 28714207 28725641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02038 127 1429 C2H2 Transcription Factor Family AT2G23740 51.784 0.0 1323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun2g02038 Pre-SET 2.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02038 - - gmx:100786757 2583.52