Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02028 ATGTCCCAAGATTTTCAACCAGGAATCTTCAGCTTCCCGAATGGGTTGGAGAGAGGAAGGGCGAGTCCGCAGCAGCAGATCCGGAGGGAGAAAGTAAGGTTCGAGGCAGCGCCATTGGTAGGGATAGAGGAAGAGGAACCGGTGTACGAGAGTGCCGGGATGTTGTCGGAGATGTTCAATTTTCCGCCTGCGGCTGCGGCGGAATTGATGGAGCAGCAGCCGGTGACGGCAACGTTTAGGGCGGCGAGGCAGGGTGGAGAGTGGTACGGAAACAGACAACAACAAGGGGTGAATATGATGATGGGTGGATTGGGGGATTCGAAGAACCAAAACGGTGTGAATAACAACCAGCATCAACCACATCACCACCAGATTTCAAGCATTAATGCTGACTCAGCAGCTGCCATGCAGCTTTTTCTGATGAACCCTCAAACGAGGTCGCCTTCCCCTCCTCAAAGCCACGCCACTCCTTCTTCAACACTCCACATGTTGCTTCCCAATCCTTCTTCCAATTCCCTCCAAGGTTTCACCGGTTCGGGCGTGGGAGGGTCTTTTGGGCAATTCACATGGGTTCCCGAGAGTGCTCATCATCAGCAAGGAGGCGTGATGGAAGGGCAAGGTCTTTCGCTATCGTTGTCTTCTTCGCTGGAAGCAGCGAAAGCTGAGGAATTGAGGATGGGGGACACTGGTTTTCTATATTACAATCATCAACAAGGGGGTGGTGTGGGAGCTGCCGGTTCTTCTTCTTCTTCCACAGTTCAATTTCCGTACAAGAACAACAGTCATCACCAAGCATTGCATTTGCAAGGGGTGATAGGACACGACAACAACCAGCAGGGACATGTTGGGTTCGGGTCATCCTCGTTAGGTGTAGTTAATGTTCTGAGAAACACAAAGTATGTGAAGGCTGCACAGGAGTTGCTTGAAGAGTTTTGCAGTGTTGGAAGGGGTCAGTTTAAGAAGAGCAAGTTGAATAGGCAGAATTCAAACCCTAATTCAAATCCCGACGGTGGTGGTGGTGGCGGTGGTTCTTCGCCTTCGTCAAAAGATGCTGGTATTCCTCCTCCTCCGCCTCCTCCTTTGTCAGCCGGTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTGGACGAGGTGGACAGGAGATACAACCATTACTGCGAGCAGATGCAAATGGTGGTGAACTCATTCGACCTGATGATGGGTTTTGGTGCGGCGGTTCCATACACAGCACTGGCGCAGAAAGCAATGTCTCGGCATTTCCGGTGTCTGAAGGACGCAATAACAGCACAGCTGAAGCAAAGTTGCGAGCTACTAGGAGAGAAAGAGGGGGCGGGGACCTCAGGTTTGACCAAGGGTGAGACCCCAAGGCTTAAGGTTCTAGAACAAAGCCTAAGACAGCAGAGAGCCTTTCACCAGATGGGGATGATGGAACAAGAAGCTTGGAGACCCCAGAGAGGCTTGCCTGAACGTTCTGTCAACATTTTGAGAGCCTGGCTTTTCGAACATTTTCTCCATCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGACTATCGCGAAATCAGAGAAGATACCTCGAAGTCTAA 1614 0.5093 MSQDFQPGIFSFPNGLERGRASPQQQIRREKVRFEAAPLVGIEEEEPVYESAGMLSEMFNFPPAAAAELMEQQPVTATFRAARQGGEWYGNRQQQGVNMMMGGLGDSKNQNGVNNNQHQPHHHQISSINADSAAAMQLFLMNPQTRSPSPPQSHATPSSTLHMLLPNPSSNSLQGFTGSGVGGSFGQFTWVPESAHHQQGGVMEGQGLSLSLSSSLEAAKAEELRMGDTGFLYYNHQQGGGVGAAGSSSSSTVQFPYKNNSHHQALHLQGVIGHDNNQQGHVGFGSSSLGVVNVLRNTKYVKAAQELLEEFCSVGRGQFKKSKLNRQNSNPNSNPDGGGGGGGSSPSSKDAGIPPPPPPPLSAGDRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLMMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKQSCELLGEKEGAGTSGLTKGETPRLKVLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQRRYLEV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02028 537 MobiDBLite consensus disorder prediction 1 26 - -
Viun2g02028 537 SUPERFAMILY Homeodomain-like 478 531 IPR009057 -
Viun2g02028 537 MobiDBLite consensus disorder prediction 322 367 - -
Viun2g02028 537 MobiDBLite consensus disorder prediction 322 341 - -
Viun2g02028 537 CDD homeodomain 486 531 IPR001356 GO:0003677
Viun2g02028 537 SMART prehox3 289 434 IPR006563 -
Viun2g02028 537 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 160 531 - -
Viun2g02028 537 MobiDBLite consensus disorder prediction 106 126 - -
Viun2g02028 537 Pfam Associated with HOX 294 433 IPR006563 -
Viun2g02028 537 Gene3D - 492 533 - -
Viun2g02028 537 Pfam Homeobox KN domain 503 531 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02028 Viun-Chr2 28690989 28697083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02028 1 531 Homeobox Transcription Factor Family AT4G36870 51.630 1.03e-143 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02028 - - gmx:100786231 815.068