Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02005 ATGACCGGAGGCGGATCGACGGGGAGGATGCCGACATGGAAGGAGAGGGAGAACAACAAGAGGAGAGAAAGAAGACGGAGAGCGATTGCGGCTAAGATCTACGCAGGCCTTCGAGCTCAGGGGAACTACAAGCTTCCCAAACACTGCGACAACAACGAGGTCCTCAAGGCTCTCTGCGCAGAAGCTGGCTGGATCGTGGAAGAAGATGGCACTACCTACAGAAAGGGATGCAAGAGACCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGCGTGTTCTTCGATCCAGCCAAGTCCACAATCTTCCTCATTCCCGAGTCCTGTGCCTTCCTATCACGCTAGTCCAACCTCTTCCTCCTTCCCCAGCCCCACTCGCATTGACGCCAACCCCTCTTCCTTTCTCATCCCATTCATCCGCAACATAACTTCAATCCCCGCCAACCTCCCACCTCTCAGGATATCCAACAGCGCCCCTGTCACCCCACCTCTTTCCTCTCCCCGGACCTCCAAGCGCAAGGCGGACTTCGATTCCCTCTCCAACGCCTCCTTCCGCCACCCTCTTTTCGCCACCTCCGCCCCCTCCAGCCCCTCGCGCCGCCACCACGTCGCCACTTCCACCATCCCCGAGTGCGACGAGTCAGACGCTTCCACCGTCGACTCTGCCTCCGGCCGTTGGGTTAGTTTTCAGGGTCAGACCGCCGCCGGCCCCCCTTCCCCTACCTTTAACCTCATGAAACCCGCTATGCACCAGATCCCTGCTCAGGAGGGCGTACAGTGGGGTTCCGTTGCGGAGATAGCCAGAGGAGTGTCCGATTTTGACTTCGAGAATGGCAGAGTGAAGCCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGAATTGGAGCTTACTCTCGGATTTGGAAAAGCTTGA 924 0.5779 MTGGGSTGRMPTWKERENNKRRERRRRAIAAKIYAGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKRPTGSEIGGTPPNISACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRIDANPSSFLIPFIRNITSIPANLPPLRISNSAPVTPPLSSPRTSKRKADFDSLSNASFRHPLFATSAPSSPSRRHHVATSTIPECDESDASTVDSASGRWVSFQGQTAAGPPSPTFNLMKPAMHQIPAQEGVQWGSVAEIARGVSDFDFENGRVKPWEGERIHEVGMDELELTLGFGKA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02005 307 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 303 IPR033264 GO:0003700|GO:0006351|GO:0009742
Viun2g02005 307 MobiDBLite consensus disorder prediction 152 177 - -
Viun2g02005 307 MobiDBLite consensus disorder prediction 191 205 - -
Viun2g02005 307 MobiDBLite consensus disorder prediction 191 221 - -
Viun2g02005 307 Pfam BES1/BZR1 plant transcription factor, N-terminal 7 131 IPR008540 -
Viun2g02005 307 MobiDBLite consensus disorder prediction 152 170 - -
Viun2g02005 307 MobiDBLite consensus disorder prediction 86 127 - -
Viun2g02005 307 MobiDBLite consensus disorder prediction 1 25 - -
Viun2g02005 307 MobiDBLite consensus disorder prediction 73 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02005 Viun-Chr2 28523008 28524832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02005 9 307 BZR Transcription Factor Family AT1G75080 58.255 4.31e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Viun2g02005 BES1_N 2.7e-64 No_clan