Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02000 ATGAAGAAAATGATGAGGGATAATGCCATGGTTAGGAGAATCTCTGCTTGTGAGACAATGGGGTCGGCAACAACGATCTGCACTGATAAAACTGGTACTCTTACAATGAATGAGATGAAGGTGAGTGAGGTTTGGGTGGGAAAAAAGCTAATAGCAGAAGGTGGGTATTTGGCGCCGGGTTTAGTCCAATCATTGAAGGAAGGAATTGGGCTGAATACCACTGGAAGTGTTTACCAACCCCAAGAAATTTCTCTGCCTGAAATCTCAGGTAGTCCTACTGAGAAAGCGTTGCTTTCTTGGGCGGTGATGGATTTGGGGATGGACATTGATGAAGTGAAGCAGCATTGTGAGATAATTCACGTGGAGACGTTTAACTCTGAGAAGAAGAGAAGTGGGGTTCTGATAAGGGAGAAGAGAGGAAGCAACATGGTGCATACACACTGGAAAGGTGCTGCTGAGATGATATTGGCAATGTGTTCAAATTACCATGACAACACAGGGGAAATCATGATCATGGGTGATGAAGAACGAGCACAAATTGGGAACATTGTGAAGAACATGGCTACAAAGAGTTTGCGATGCATTGCCTTTGCCCAAAAGAGTTCCAACGAGAAGGTCTGTGAAAAGCTTGAAGAGACAGAACTAACACTGTTGGGAATACTTGGATTGAAAGACCCTTGTAGGCCTGGAGTGGAAGCAGCAGTTGAATCATGCAAAAATGCTGGAGTGAAGATCAAGATGATCACGGGAGATAATGTGCACACAGCGAAGATGTTTGCGGGCACTGAGAGATTGAGTTGGGGCCAATGGGGTGTTTGTGTTGCCATTGGAGCTTTGTCTTGGCCAATTGGCCTGCTTGTGAAGTGTATCCCTGGCCGTCCCAGCAAGTAG 891 0.4568 MKKMMRDNAMVRRISACETMGSATTICTDKTGTLTMNEMKVSEVWVGKKLIAEGGYLAPGLVQSLKEGIGLNTTGSVYQPQEISLPEISGSPTEKALLSWAVMDLGMDIDEVKQHCEIIHVETFNSEKKRSGVLIREKRGSNMVHTHWKGAAEMILAMCSNYHDNTGEIMIMGDEERAQIGNIVKNMATKSLRCIAFAQKSSNEKVCEKLEETELTLLGILGLKDPCRPGVEAAVESCKNAGVKIKMITGDNVHTAKMFAGTERLSWGQWGVCVAIGALSWPIGLLVKCIPGRPSK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02000 296 ProSitePatterns E1-E2 ATPases phosphorylation site. 29 35 IPR018303 -
Viun2g02000 296 Gene3D - 77 224 IPR023299 GO:0000166
Viun2g02000 296 PRINTS P-type cation-transporting ATPase superfamily signature 241 251 - -
Viun2g02000 296 PRINTS P-type cation-transporting ATPase superfamily signature 219 230 - -
Viun2g02000 296 PRINTS P-type cation-transporting ATPase superfamily signature 27 41 - -
Viun2g02000 296 Gene3D - 225 265 IPR023214 -
Viun2g02000 296 SUPERFAMILY HAD-like 24 262 IPR036412 -
Viun2g02000 296 Gene3D - 1 57 - -
Viun2g02000 296 PANTHER CATION TRANSPORTING ATPASE 1 260 - -
Viun2g02000 296 PRINTS Sodium/potassium-transporting ATPase signature 20 41 - -
Viun2g02000 296 PRINTS Sodium/potassium-transporting ATPase signature 146 164 - -
Viun2g02000 296 FunFam Calcium-transporting ATPase 37 226 - -
Viun2g02000 296 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 33 231 IPR023299 GO:0000166
Viun2g02000 296 Pfam Cation transport ATPase (P-type) 80 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02000 Viun-Chr2 28482473 28483363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02000 253 291 Primary Pumps ATPases AT3G63380 53.846 1.22e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02000 K01537 - vun:114174623 571.237