Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01974 ATGTCTGACTCGCATCTAACTTTCTACTCTCCTTCGTCCATTCTTCCTCTTCTCCCAATCTTCTTCTTCGTCTTCTTCATTCTTATCAAAAGAAAACAAACCAAACCCAGGCTCAATCTCCCCCCCGGTAACATGGGTTGGCCATTCCTCGGTGAAACCATTGGGTATTTGAAGCCTTATTCTGCTACCACAATAGGGGAATTCATGGAGCAGCACATAGCAAGGTACGGTACAATTTACAAGTCGAAGCTATTTGGGGAGCCAGCAATAGTGTCAGCAGACGCAGGACTCAACAGGTTCATTCTACAGAACGAGGGGAAACTGTTCGAGTGCAGCTACCCCAGAAGCATTGGTGGAATACTCGGGAAATGGTCCATGTTGGTCTTAGTTGGCGACATGCACAGAGACATGCGGGTTATATCACTCAACTTTCTGAGCCACGCCAGGCTCAGAACCCACCTCTTGAAAGAGGTGGAGAAACACACCCTCTTGGTTCTAAACTCTTGGAACCAAAATTGCACATTCTCGGCCCAGGATGAAGCCAAGAAGTTCACCTTCAATCTCATGGCCAAGCATATCATGAGCATGGATCCTGGGGAAATCGAGACAGAGCAACTCAAGAAAGAGTATGTCACTTTCATGAAAGGGGTGGTATCCGCGCCATTGAATCTACCTGGAACTGCATACCGAAAGGCGTTAAAGTCTAGGTCCACCATACTGAAGTTCATAGAGGGGAAAATGGAAGAGAGAGTGAAGAGAATCCAAGAGGGAAACGAGGGTTTGGAGGAAGACGATCTTCTGAACTGGGTTTTGAAGCACTCGAATCTCTCGACCGAACAGATTCTGGACTTGATTCTTAGCTTGCTCTTCGCCGGCCACGAAACTTCGTCGGTAGCCATAGCTCTAGCCATTTACTTTTTGCCCGGTTGTCCTCAAGCTATGCAACAGTTAAGGGAAGAACACAGTGAAATTGCCAGAGCCAAGAAACAAGCAGGGGAAGTGGAACTCACATGGGACGATTACAAACGCATGGAATTCACTCATTGTGTTGTGAACGAGACACTGAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTCTGAAAGACGTGAATTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGCGGTCGTGGTGGGAGTTGTCCAAGCAAGAACGCGGCAAACAATAACTTTCTGCCGTTCGGAGGAGGTTCACGGCTGTGCGCGGGATCGGAGTTAGCGAAGCTTGAAATGGCGGTTTTCATCCATCATCTCATCCTCAACTACCACTGGGAATTGGCCGAAACAGATCAGGCTTTTGCCTACCCTTTCGTGGACTTCCCAAAGGGCCTACCCATTAGAGTCCAAGCCCATTCCCTCATTTGA 1482 0.4798 MSDSHLTFYSPSSILPLLPIFFFVFFILIKRKQTKPRLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLNSWNQNCTFSAQDEAKKFTFNLMAKHIMSMDPGEIETEQLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGKMEERVKRIQEGNEGLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAMQQLREEHSEIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVNYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGGRGGSCPSKNAANNNFLPFGGGSRLCAGSELAKLEMAVFIHHLILNYHWELAETDQAFAYPFVDFPKGLPIRVQAHSLI 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01974 493 CDD CYP90-like 72 487 - -
Viun2g01974 493 Gene3D Cytochrome P450 29 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 FunFam Cytochrome P450 90B1 30 489 - -
Viun2g01974 493 Pfam Cytochrome P450 41 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 SUPERFAMILY Cytochrome P450 37 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01974 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Viun2g01974 493 PANTHER CYTOCHROME P450 26 36 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01974 Viun-Chr2 28285252 28289376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01974 30 411 Cytochrome P450 AT3G50660 77.171 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01974 K09587 - gmx:100802498 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01974 2 28285252 28289376 Viun2g01974 2 28285252 28289376 ECH
Viun2g01974 2 28285252 28289376 Viun3g03691 3 43801404 43805386 PCT