Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01958 ATGGCATCATCTTGGACTCCAAGGCAAAACAAACTATTTGAAGATGCTCTTGCTATATATGATAGGGACACCCCCGACAAATGGCAGAATGTGGCAAGAGTAGTTGGAAAATCCGTTGAGGAAGTTAAGACTCACTTTGAGATCCTCAAAGAAGATGTCAAACGCATTGAACGTGGACAAATCCCATTGCCTAATTATACAGGTATAATTATACAGGTTCTCAATGATCCAGAGAAACCAGAATGA 246 0.4024 MASSWTPRQNKLFEDALAIYDRDTPDKWQNVARVVGKSVEEVKTHFEILKEDVKRIERGQIPLPNYTGIIIQVLNDPEKPE 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01958 81 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Viun2g01958 81 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Viun2g01958 81 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 67 IPR044636 GO:0003700
Viun2g01958 81 SMART sant 1 52 IPR001005 -
Viun2g01958 81 Gene3D - 2 63 - -
Viun2g01958 81 FunFam Transcription factor SRM1 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01958 Viun-Chr2 28173977 28176329 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01958 - - pvu:PHAVU_003G254400g 116.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01958 2 28173977 28176329 Viun2g01958 2 28173977 28176329 ECH
Viun11g02439 11 38068113 38069794 Viun2g01958 2 28173977 28176329 ECH