Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01896 ATGAATTGGTTCCTAAAATCATCGGAAGCCATGTCCAACCTAAATCCATTCAACATCGCCATCATACTCATCCTCCCACTAACAACACTTCTCTTTGTTTTGCTACATCGTACTCGTCGAAGAGCACCGTATCCGCCGGGACCAAAGGGGTTACCCATCATAGGAAACATGTTCATGATGGACCAGTTAACCCACCGCGGTCTCGCCACCCTCGCCAAGCAATACGGCGGCGTTTTCCACCTCCGCATGGGCTTCCTCCACATGATCGCCATCTCCGACCCGGAGGCGGCGCGTCAGGTTCTCCAAGTCCATGACAACATCTTCTCCAACCGCCCCGCCACCATCGCCATCAGCTACCTCACCTACGACCGCGCCGATATGGCCTTCGCACACTACGGCCCCTTCTGGCGCCAGATGCGCAAGCTCTGCGTCATGAAACTCTTCAGCCGCAAGCGCGCCGAGTCCTGGCAATCCGTGCGTGACGAGGTCGACGTTGCAGTCCGCTCCGTCGCGGCCTCCGCCGGAAAAGCCATCAACGTCGGCGAGCTCGTGTTCAACCTGACGAAAAACATCATCTACCGCGCGGCCTTTGGGTCGAACTCGCAGGAGGGGCAGGACGAGTTCATTGGGATTCTGCAGGAGTTTTCGAAACTCTTTGGCGCTTTCAACATCGCAGATTTTATACCCTACCTCGGGCGCGTGGACCCGCAGGGGCTCAACGCGCGCCTTGCTAGGGCTCGCAGCGCGTTGGATAGCTTCATCGATAAGATCATCGATGAGCACGTAGAGAAGAAGAAGAAGAATGAGAACGGTGTCTGTGATGGAGAAACGGACATGGTGGATGAGTTACTCGCGTTCTACACCGAAGAGGCCAAGTTGAACAATGAACCTGAGGATTTGCAGAACTCTATCAGACTCACTAAGGATAACATCAAAGCTATCATTATGGATGTGATGTTTGGAGGGACGGAAACCGTGGCATCGGCGATTGAGTGGGCCATGGCGGAGCTAATGAGAAGCCCAGAAGACCAAAAGAGGGTCCAACAGGAGCTGGCGGATGTAGTGGGCCTGGACCGTCGGGTCGAAGAGTCCGATTTTGAGAAACTCACATTCCTAAAATGTGCCCTTAAAGAGACCCTACGCCTCCACCCTCCGATCCCGCTCCTCCTCCACGAGACGGCGGAGGAAGCGACGGTCAGCGGCTACTTCATCCCCAAGAAGGCGCGCGTGATGATCAACGCGTGGGCAATTGGGAGAGACAAAAACTCCTGGGAGGAACCCGAAACATTCAAACCCGCCCGGTTTTTGGAACCGGGCGTGCCCGACTTCAAGGGTAGCAACTTCGAGTTCATTCCTTTCGGGTCGGGTCGAAGGTCCTGCCCCGGGATGCAGTTGGGGCTGTACGCGCTTGAATTGGCGGTGGCTCACCTCCTTCACTGCTTCACGTGGGAATTGCCAGATGGAATGAAACCCAGTGAGTTGGACATGGGTGACATTTTCGGACTCACCGCTCCAAAAGCCACGCGACTCGTCGCTGTGCCAACCAAGCGCGTGGTGTGCCCTCTCTTTTAG 1572 0.5573 MNWFLKSSEAMSNLNPFNIAIILILPLTTLLFVLLHRTRRRAPYPPGPKGLPIIGNMFMMDQLTHRGLATLAKQYGGVFHLRMGFLHMIAISDPEAARQVLQVHDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDVAVRSVAASAGKAINVGELVFNLTKNIIYRAAFGSNSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGRVDPQGLNARLARARSALDSFIDKIIDEHVEKKKKNENGVCDGETDMVDELLAFYTEEAKLNNEPEDLQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDQKRVQQELADVVGLDRRVEESDFEKLTFLKCALKETLRLHPPIPLLLHETAEEATVSGYFIPKKARVMINAWAIGRDKNSWEEPETFKPARFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPDGMKPSELDMGDIFGLTAPKATRLVAVPTKRVVCPLF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01896 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Viun2g01896 523 SUPERFAMILY Cytochrome P450 45 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 CDD CYP71-like 74 510 - -
Viun2g01896 523 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 FunFam Cytochrome P450 84A1 37 516 - -
Viun2g01896 523 Gene3D Cytochrome P450 37 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PANTHER CYTOCHROME P450 84A1-RELATED 20 522 - -
Viun2g01896 523 Pfam Cytochrome P450 45 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g01896 523 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01896 Viun-Chr2 27730799 27734616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01896 8 522 Monolignol Biosynthesis Gene Families AT4G36220 75.097 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01896 K09755 - gmx:100793538 878.626