Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01866 ATGATGGAACCTCAACAACCACAAGGGAGCCAACCAAACGAGGAGGGTGGCAGTGGAAAAGGGGGCTTTCTGAGCAGGCAAAGTAGTACACGGTGGACTCCCACCACCGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATAATGTCCCCATGCAAAGACCTCCTGCCCCAACTAATGCTGCTCCTTGGAAACCTGATCATGATCCTCCTATTCATACCCACTATTCTAACATTTCTTCCACAGGGATCTCTTCTGCATCATCTTCTTCGGTTGAGATGATCACCGTCTCCCAGATGGGGAATTACGGCTATGGTTCTGTTCCCATGGAGAAAAGTTTTAGGGACTGTTCAATATCTGCTGGGGGTAGCAGTGGCCATGTTGGAATAAACCACAACTTGGGATGGGTTGGCGTGGATCCTTATTCCTCACCCTATGCCAACTTCTTTGGCAAAATAAGGCCAACTGAAGAAACCCTGGAAGAAGAAGAAGAACAAGAAGAGGATGGTGCTGCTGAGATTGAAACTCTTCCTTTATTTCCTATGCACGGTGAGGACATTCATGGCTATTGCAACCTCAAGTCTAATAACTCTTACAACTACGATGGAAACGGCTGTTATCATTCTGAAGACGGCTTCAAGAATGGTTCTCGTGCTTCTTTGGAGCTCAGTCTCAATTCCTACACTCGCAGATCTCCAGATTTAGCTTAA 858 0.458 MMEPQQPQGSQPNEEGGSGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNVPMQRPPAPTNAAPWKPDHDPPIHTHYSNISSTGISSASSSSVEMITVSQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGINHNLGWVGVDPYSSPYANFFGKIRPTEETLEEEEEQEEDGAAEIETLPLFPMHGEDIHGYCNLKSNNSYNYDGNGCYHSEDGFKNGSRASLELSLNSYTRRSPDLA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01866 285 CDD homeodomain 30 92 IPR001356 GO:0003677
Viun2g01866 285 MobiDBLite consensus disorder prediction 1 15 - -
Viun2g01866 285 SMART HOX_1 27 95 IPR001356 GO:0003677
Viun2g01866 285 Pfam Homeodomain 29 90 IPR001356 GO:0003677
Viun2g01866 285 SUPERFAMILY Homeodomain-like 23 97 IPR009057 -
Viun2g01866 285 Gene3D - 24 90 - -
Viun2g01866 285 ProSiteProfiles 'Homeobox' domain profile. 25 91 IPR001356 GO:0003677
Viun2g01866 285 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 9 278 IPR044555 GO:0003700|GO:0099402
Viun2g01866 285 MobiDBLite consensus disorder prediction 1 35 - -
Viun2g01866 285 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01866 Viun-Chr2 27555540 27556756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01866 23 235 Wox Gene Family AT2G17950 44.223 1.44e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Viun2g01866 Homeodomain 1.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01866 - - vra:106776674 530.791