Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01856 ATGATTTCTTCTGTGGCCTTTCAACCGTCTCTTCCAGCCGTTAACTTCTCCGGTAAAGCCCTGACTTCGCCGTCCAGTAAGGTCAGATCCCGTCCAATAGTCGCCTTCGCCACCGCCACCGCTACTGCAACCGAGGAAGCTCGATCTTCCTGGACAGAGAAACCACGCCCTTCGTATCTCAACTCCTCCTGCTCTTCTCACTACGATATCCTCGGAATCCCCGCCGGTGCCTCCAGCCAGGAAATCAAGGCTGCGTATCGGCGTTTGGCCAGAGTCTGCCACCCGGACGTGGCGACGATCGACCGGAAGAATTCCTCCGCTGACGAATTCATGAAGATCCACGCTGCGTATTCCACTCTCTCGGATCCTGACAAACGCGCCAACTACGACCGCAGCCTATTCCGGCGACAACGGCCGCTGTCAACTGCGGCGGTGTTTTCCGGCTACACGCGCCGGAACTGGGAAACGGATCAGTGCTGGTAG 483 0.5776 MISSVAFQPSLPAVNFSGKALTSPSSKVRSRPIVAFATATATATEEARSSWTEKPRPSYLNSSCSSHYDILGIPAGASSQEIKAAYRRLARVCHPDVATIDRKNSSADEFMKIHAAYSTLSDPDKRANYDRSLFRRQRPLSTAAVFSGYTRRNWETDQCW 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01856 160 Gene3D DnaJ domain 57 152 IPR036869 -
Viun2g01856 160 SUPERFAMILY Chaperone J-domain 63 136 IPR036869 -
Viun2g01856 160 SMART dnaj_3 65 125 IPR001623 -
Viun2g01856 160 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Viun2g01856 160 PRINTS DnaJ domain signature 105 125 IPR001623 -
Viun2g01856 160 PRINTS DnaJ domain signature 86 101 IPR001623 -
Viun2g01856 160 PRINTS DnaJ domain signature 68 86 IPR001623 -
Viun2g01856 160 CDD DnaJ 67 122 IPR001623 -
Viun2g01856 160 Pfam DnaJ domain 67 130 IPR001623 -
Viun2g01856 160 ProSiteProfiles dnaJ domain profile. 66 133 IPR001623 -
Viun2g01856 160 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 21 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01856 Viun-Chr2 27475396 27476220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01856 67 130 C2H2 Transcription Factor Family AT1G74250 42.647 1.71e-08 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01856 2 27475396 27476220 Viun2g01856 2 27475396 27476220 ECH