Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01834 ATGGCGAAGGCTATAGCTGATGCTGAGTATGTGAAGGAAATTGAGAAGGCTCGTCGTGACCTTCGCGCTCTTATCTCTAGCAGAAACTGTGCCCCTCTCATGCTTCGATTAGCGTGGCATGATGCTGGTACCTATGATGTTAAGACAGGAACAGGAGGCCCCAATGGTTCTATCAGGAATGCACCAGAGTTGAATCACGCAGCAAACAAGGGGCTGCAAACAGCAGTTCTGTTCTGTGAGGAAGTGAAGGCCAAACATCCAAAAGTTTCATATGCTGACCTTTACCAGCTAGCTGGTGTTGTTGCAGTAGAGATCACAGGGGGACCAACTATCGACTTTGTTCCAGGAAGAAAGGATTCATTGGAATCTCCAGCAGAAGGGCGTCTTCCAGATGCCAAACAAGGTGCATCGCATTTAAGAGAAATCTTTTATCGCATGGGGCTAAGTGACAGAGACATTGTGGCTCTATCTGGAGGTCACACTTTGGGAAAGGCACATAGAGATCGTTCTGACTTTGAAGGGCAGTGGACAAAGGACCCTTTGAAGTTTGATAACTCATATTTTGTGATGAGGATGCTTTTTTCAAAGATTATGCAACCTCGCACAAAAAACTCTCAGAGCTTGGCTTCATTTTGA 636 0.4591 MAKAIADAEYVKEIEKARRDLRALISSRNCAPLMLRLAWHDAGTYDVKTGTGGPNGSIRNAPELNHAANKGLQTAVLFCEEVKAKHPKVSYADLYQLAGVVAVEITGGPTIDFVPGRKDSLESPAEGRLPDAKQGASHLREIFYRMGLSDRDIVALSGGHTLGKAHRDRSDFEGQWTKDPLKFDNSYFVMRMLFSKIMQPRTKNSQSLASF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01834 211 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Plant ascorbate peroxidase signature 168 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 Pfam Peroxidase 18 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Viun2g01834 211 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 ProSiteProfiles Plant heme peroxidase family profile. 89 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 6 190 IPR044831 GO:0004601|GO:0034599
Viun2g01834 211 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
Viun2g01834 211 FunFam Cytosolic ascorbate peroxidase 17 135 - -
Viun2g01834 211 Gene3D Peroxidase, domain 2 138 209 - -
Viun2g01834 211 SUPERFAMILY Heme-dependent peroxidases 20 193 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun2g01834 211 Gene3D - 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01834 Viun-Chr2 27336880 27339330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01834 31 166 Peroxidase AT4G30170 34.507 8.34e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01834 K00434 - gmx:100806101 353.599