Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01811 ATGGAAGAGGTGTGGAAAGACATAAACCTCGCTACCTTAAATGACCAAGTCACTACAACGCACTCCAACTTCGGAGGAGTAATCCTCCAAGACTTTCTCGCTCGACCCTTCACCATCGAACCACCAAACACCATTCTTTCCTCCCAAACCCCCTCCCTCTACGCCGCCCCCTCCTCGCCGGCGCCACCACTCCTCACCGCTCTCAGCCTCAGCTCCCACCCCCACCTCCATTTCGACCCTCACACGCACAAACCCCACCACCACCCTCCTCCACCCTCCAACCACCCTTGCTTCGCCGCCCCAACCACCGCCTCCTTAGGCGCCAAGAGATTCGCAGAACCCGATTGCAACCTCGGCGACAGAAGAAACAAGCGCATGATCAAGAACCGCGAGTCCGCTGCACGATCGCGAGCCAGGAAACAGGCTTACACGAATGAATTGGAGGTAGAAGTTGAGCAATTGAAGGAAGAGAATGCAAGGCTGAAAAGACAGCAAAAACAGTTAAGTGAAGTTGCAGCGAGTGAGCAAAAGAAGAAGGGTAGCCTATATCGAGCATCTACGGCTCCATTTTGA 573 0.5445 MEEVWKDINLATLNDQVTTTHSNFGGVILQDFLARPFTIEPPNTILSSQTPSLYAAPSSPAPPLLTALSLSSHPHLHFDPHTHKPHHHPPPPSNHPCFAAPTTASLGAKRFAEPDCNLGDRRNKRMIKNRESAARSRARKQAYTNELEVEVEQLKEENARLKRQQKQLSEVAASEQKKKGSLYRASTAPF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01811 190 Coils Coil 137 178 - -
Viun2g01811 190 SMART brlzneu 117 180 IPR004827 GO:0003700|GO:0006355
Viun2g01811 190 MobiDBLite consensus disorder prediction 75 95 - -
Viun2g01811 190 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 119 177 - -
Viun2g01811 190 Gene3D - 120 177 - -
Viun2g01811 190 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 119 170 IPR004827 GO:0003700|GO:0006355
Viun2g01811 190 Pfam bZIP transcription factor 121 173 IPR004827 GO:0003700|GO:0006355
Viun2g01811 190 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 173 IPR043452 GO:0003700|GO:0045893
Viun2g01811 190 SUPERFAMILY Leucine zipper domain 121 170 IPR046347 GO:0003700|GO:0006355
Viun2g01811 190 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 124 139 IPR004827 GO:0003700|GO:0006355
Viun2g01811 190 MobiDBLite consensus disorder prediction 168 190 - -
Viun2g01811 190 CDD bZIP_plant_BZIP46 121 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01811 Viun-Chr2 27227173 27228674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01811 107 190 bZIP Transcription Factor Family AT3G56850 53.333 9.85e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun2g01811 bZIP_1 7.2e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01811 K14432 - gmx:102660922 174.481