Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01793 ATGGCGGACTCTGGCGGCGACGACAATGGCGTCACCTACCTTCATGGTGACCTGGATTTGAAAATTATTGAGGCGAGGCACTTGCCGAACATGGACATCTTCTCGGAGCGTCTCCGCCGCTGCGTAACCGGCTGCGACACTATCAAATTCCACTCCGAGGACCCCGCCGACGGTGGAAGCCAGCGGACGCGGCAGCAGCGCCACCACCGGAGGATCATCACGAGTGACCCGTACGTGACGGTTTCGGTGCCGCAGGCGACGGTGGCGCGCACGCGCGTGCTGAAGAACTCGTCGAACCCGGCGTGGAACGAGCGGTTTCACATCCCGCTCGCGCATCCGGTTGTGGATTTGGAGTTCCGCGTGAAGGACGACGACGTTTTCGGCGCGCAGATTATTGGAACCGTGAAGATTCCGGCGCAGCTGATTGCCACAGGCCAGTTGATTTCCGACTGGTACCCTATCGTCGGGCCGTCTGGGAAGCCGGCGAAGCCGGACACGGCGCTGCACCTGGAGATGAAATTCATGTCGGTGGAGAAGAATTTGCTTTACCAACGAGGCATTGCGGCGGATCCGGAGCGCCGCGGAGTGAGGAACACGTATTTTCCGGTGAGAAAGGGGAGTTCGGTGAGGTTGTACCAGGATGCGCAGTGTCCTGAAAGTGGCGGAGCGAAGTTACCGGAGGTTAAGCTTGAGAATGGAGAGGTTTACAGGCACGGGAAGTGTTGGGAGGATATTTGTTATGCTATATCTGAGGCTCATCACATGGTGTATTTGGTGGGCTGGTCGATTTACCATAAGGTGAGGCTTGTTAGAGAGCCTACTAGGCCGTTGCCACGAGGTGGCGATTTGACGCTTGGCGATTTGCTGAAGTATAAGTCTGAGGAAGGGGTGAGAGTGTTGTTGCTGGTTTGGGATGATAAAACTTCGCACGACAAGGTTTTCCTCAAGACGACTGGTGTGATGCAGACTCATGATGAGGAAACCAGGAGGTTTTTTAAACATTCTTCAGTAATGTGTGTTCTGTCGCCTCGTTATGCCAGCAGCAAGATGAGCTTCTTGAAGCAACAGGTTGTTGGGACGGTCTTCACACACCACCAAAAATGTGTAATTGTGGACACACAGGCCACAGGGAATAATCGGAAGATAACTGCTTTTCTTGGAGGTCTTGATCTATGTGATGGTCGCTATGACACACCAGAGCATCGTCTGTTTCGTGATCTTGACACTGTATTTTCTGGTGATTTCCACAATCCTACATTTCCTGCTGGAACAAGGGTTCCTAGACAACCATGGCATGATTTACACTGCAGAGTAGATGGACCTGCTGCATACGATGTTCTTATTAATTTCGAGCAGCGATGGAAAAAGGCAACCAAGTGGAAAGAATTTGCAATCCTATTTAAAAAATCCTCTCAATGGCATGATGATGCTTTGATAAGAATAGAACGCATCTCATGGATATTAAGTCCTTCTGTTACCACAAAGGAAAATTATACAGTTGTTCCAGAGGATGACCCTTTAGTGTGGGTTTCTAGCGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGGTCCCTCAAAGGATTTCCCAAACATGTTGATGTTGCTCTGTCCCAGAATCTTATTTGTGCTAAAAGTTTGGTCATAGACAAAAGCATTCAAACAGCGTACATTGAAGCAATCAGATCTGCTCAACACTTTATTTATATTGAAAACCAGTACTTCATTGGATCATCGTATGCATGGCCTTCTTATAAAGATGCAGGGGCTGATAATCTCATCCCAATGGAGTTGGCGCTGAAAATTGCTAGTAAAATCAGAGCTAAGGAAAGGTTTGCTGTCTATGTTGTTTTACCAATGTGGCCAGAAGGTGATCCAAAAACTGGGGCTATGCAAGAAATCCTCTTTTGGCAGGGCCAAACAATGCAAGCAATGTATAACGTAGTTGCTAGAGAGTTGAAAGCAATGCAACTTTCTCATATAAGCCCACAAGATTACCTCAATTTTTATTGCCTTGGTAATCGGGAAGACTTCAATGACGAAAGTACAAGCACGAATGGTGCACAGGTATCAGGAGCATATAAACATCGCAGATTTATGATTTATGTGCATGCTAAGGGAATGATCGTTGATGATGAGTATGTTATAATTGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTGCATATCAACCGCATTACACATGGTCAGCAAAGCAAAGACATCCATATGGTCAGATTTATGGTTACAGAATGTCACTTTGGGGAGAGCATCTTGGCATGTTAGATGAAACTTTTAAGGAGCCAGAGAGTTTGGAGTGTGTGCATAAAGTGAATGAAATTGCTGAAAACAATTGGAAATTATTCGCTTCTGAAGATTTCTCACTATTGCAAGGACATCTTCTTAAGTATCCTGTAAAGGTAGATTCTGATGGAAAGGTTAGATCCCTACCCGACTGTGAGAATTTTCCCGATGCTGGCGGTAAGATATTAGGTGCTCACTCCACAGCAATACCAGATATTCTAACAACTTAA 2583 0.4665 MADSGGDDNGVTYLHGDLDLKIIEARHLPNMDIFSERLRRCVTGCDTIKFHSEDPADGGSQRTRQQRHHRRIITSDPYVTVSVPQATVARTRVLKNSSNPAWNERFHIPLAHPVVDLEFRVKDDDVFGAQIIGTVKIPAQLIATGQLISDWYPIVGPSGKPAKPDTALHLEMKFMSVEKNLLYQRGIAADPERRGVRNTYFPVRKGSSVRLYQDAQCPESGGAKLPEVKLENGEVYRHGKCWEDICYAISEAHHMVYLVGWSIYHKVRLVREPTRPLPRGGDLTLGDLLKYKSEEGVRVLLLVWDDKTSHDKVFLKTTGVMQTHDEETRRFFKHSSVMCVLSPRYASSKMSFLKQQVVGTVFTHHQKCVIVDTQATGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFPAGTRVPRQPWHDLHCRVDGPAAYDVLINFEQRWKKATKWKEFAILFKKSSQWHDDALIRIERISWILSPSVTTKENYTVVPEDDPLVWVSSEDDPENWHVQIFRSIDSGSLKGFPKHVDVALSQNLICAKSLVIDKSIQTAYIEAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIASKIRAKERFAVYVVLPMWPEGDPKTGAMQEILFWQGQTMQAMYNVVARELKAMQLSHISPQDYLNFYCLGNREDFNDESTSTNGAQVSGAYKHRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIAMGAYQPHYTWSAKQRHPYGQIYGYRMSLWGEHLGMLDETFKEPESLECVHKVNEIAENNWKLFASEDFSLLQGHLLKYPVKVDSDGKVRSLPDCENFPDAGGKILGAHSTAIPDILTT 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01793 860 Pfam Phospholipase D C terminal 779 849 IPR024632 -
Viun2g01793 860 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 705 732 IPR001736 GO:0003824
Viun2g01793 860 SUPERFAMILY Phospholipase D/nuclease 200 468 - -
Viun2g01793 860 PANTHER PHOSPHOLIPASE D 10 849 IPR015679 -
Viun2g01793 860 Gene3D Endonuclease Chain A 229 479 - -
Viun2g01793 860 Gene3D C2 domain 14 184 IPR035892 -
Viun2g01793 860 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 360 395 IPR001736 GO:0003824
Viun2g01793 860 SMART pld_4 360 395 IPR001736 GO:0003824
Viun2g01793 860 SMART pld_4 705 732 IPR001736 GO:0003824
Viun2g01793 860 Pfam Phospholipase D Active site motif 706 732 IPR001736 GO:0003824
Viun2g01793 860 Pfam Phospholipase D Active site motif 360 395 IPR001736 GO:0003824
Viun2g01793 860 Pfam C2 domain 16 154 IPR000008 -
Viun2g01793 860 Gene3D Endonuclease Chain A 528 756 - -
Viun2g01793 860 ProSiteProfiles C2 domain profile. 1 152 IPR000008 -
Viun2g01793 860 SMART C2_3c 17 151 IPR000008 -
Viun2g01793 860 SUPERFAMILY Phospholipase D/nuclease 556 790 - -
Viun2g01793 860 CDD C2_plant_PLD 10 175 - -
Viun2g01793 860 PIRSF PLD_plant 4 860 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Viun2g01793 860 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 176 IPR035892 -
Viun2g01793 860 FunFam Phospholipase D delta 232 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01793 Viun-Chr2 27099258 27107419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01793 1 696 Phospholipase D Gene Family (Wang group) AT4G35790 70.328 0.0 1034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01793 K01115 - gmx:100814486 1587.39