Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01782 ATGACGACGACGACGACAACAACCACCTTTGATGTCTCCGCCGCTTGTTTCCGTGTTCCTCCTCGTTTCTCACGCAATCCATGCCACACCAGGTTTTCAGTTCTGAACTCCTTGAATCCTCACAGGGGACGGATAAGCGTGAACGTTCCACCCAAGTTTCCAAACTTCCGGAGGGAAGTTGCACTGAAGGGGGATTTGGAGGCTGTTGTTCCAACTTCTGTGCCTGTGCGTGTAGCGTATGAACTTCTTCTAGCTGGTCATCGATATTTAGATGTGAGGACCCCAGAAGAGTTTGATGAAGGGCACGTTCCTGGCGCAATTAATATTCCTTATATGTTCAGAGTTGGATCAGGGATGACGAAGAACAGCAACTTCATTAGAGAGGTGTCCTCACATTTTAGAAAAGATGATGAAATTATAGTTGGGTGCCAGCTTGGTAAAAGATCTATCATGGCTGCGAGTGACTTGCTAGCTGCTGGGTTCACAGGACTCACAGACATGGCTGGTGGCTTTGCAGCTTGGACACAAAATGGACTTCCAACAGAACGATGA 552 0.4783 MTTTTTTTTFDVSAACFRVPPRFSRNPCHTRFSVLNSLNPHRGRISVNVPPKFPNFRREVALKGDLEAVVPTSVPVRVAYELLLAGHRYLDVRTPEEFDEGHVPGAINIPYMFRVGSGMTKNSNFIREVSSHFRKDDEIIVGCQLGKRSIMAASDLLAAGFTGLTDMAGGFAAWTQNGLPTER 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01782 183 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 23 182 - -
Viun2g01782 183 Gene3D - 62 182 IPR036873 -
Viun2g01782 183 ProSitePatterns Rhodanese signature 1. 98 109 IPR001307 GO:0004792
Viun2g01782 183 CDD RHOD 90 174 - -
Viun2g01782 183 ProSiteProfiles Rhodanese domain profile. 83 183 IPR001763 -
Viun2g01782 183 SMART rhod_4 73 180 IPR001763 -
Viun2g01782 183 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 72 182 IPR036873 -
Viun2g01782 183 Pfam Rhodanese-like domain 89 176 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01782 Viun-Chr2 27042002 27044418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01782 73 180 Sulfurtransferasese or Rhodanese AT5G66170 45.455 3.22e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01782 - - gmx:100499831 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01782 2 27042002 27044418 Viun3g03550 3 42328321 42330303 PCT