Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01772 ATGGCTTCCCTTGATGGTGAGAAAAGTAATGAAAATCATGTTGAGATTCGTGTTGGGGCGATTGGGGTGGAGCGAAAACGAAAGCAAGAAATTGAAGCAAAAAACATAGATTATTCTGAGAGGGCGAATTGGGTGCGTGCAGCAGTGTTGGGAGCGAACGATGGATTAGTCTCGGTGGCATCATTGATGATGGGTGTTGGAGCTGTTAAGGAGAACGTAACAGCCATGGTTCTTGCTGGTTTTGCGGGGTTAATTGCAGGGGCATGCAGCATGGCAATTGGAGAGTTTGTGTCTGTGTACACTCAGTACGACATAGAAATGGGTGAGATCGAAAGAGAGAGAGAAAACAAGGTTGTTGTTGTTGGTGATGATGATGATGATGATGGAGTGAGTGAAGAAGGTAAAAGGGAAAAGTTGCCGAATCCATTTCATGCTGCTGTAGCATCAGCTTTAGCATTTTCTGTGGGTGCAGTGGTGCCACTGCTATCTGCTGCATTCATAAGGAACCATAAAATAAGACTTGGTGTTGTTGTTGCTGTGGCTAGCATCACGTTGGTGGTGTTTGGTTGGTTAGGAGCGGTGCTCGGAAAAACTCCGATCACAAAATCTTGCCTTAGAGTGCTCATCGGAGGTTGGATGGCTATGACTCTAACATTTGGCCTCACCAAGTTATTTGCCTTTGCTGAGATTTGA 693 0.4545 MASLDGEKSNENHVEIRVGAIGVERKRKQEIEAKNIDYSERANWVRAAVLGANDGLVSVASLMMGVGAVKENVTAMVLAGFAGLIAGACSMAIGEFVSVYTQYDIEMGEIERERENKVVVVGDDDDDDGVSEEGKREKLPNPFHAAVASALAFSVGAVVPLLSAAFIRNHKIRLGVVVAVASITLVVFGWLGAVLGKTPITKSCLRVLIGGWMAMTLTFGLTKLFAFAEI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01772 230 CDD Nodulin-21 44 199 - -
Viun2g01772 230 Pfam VIT family 136 222 IPR008217 GO:0005384|GO:0030026
Viun2g01772 230 Pfam VIT family 45 117 IPR008217 GO:0005384|GO:0030026
Viun2g01772 230 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 225 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01772 Viun-Chr2 26981422 26982341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01772 8 224 Nodulin-like Gene Family AT3G43660 56.682 5.56e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01772 K22736 - gmx:100817158 300.827