Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g01740 | ATGGGTGTCTGTTTTTCTTCCCCCGCTGGCCACCGATCACTCAACTCCACATTCCCTCAAGGTTCAGCGCGTGGAAGTAGGGACTTGACAGTGTCCACGGGGAGCGTGGAAGGAAAGCGTGAAGTTGAAGTTGAAGTTTCGGAGGAGTCTGGGGTTGTCGGAAGCAGCAGTGACAGTAACAGTAACGGTAACAATAATAAGAGTGATGGTAGCATTGTTTTTCGGAGTTTGGAAATGAGGAAGCTGAAGGAGTTTAGTTTCGCGGAGCTGAAAGCAGCTACGAGGAGTTTCAAGTCAGATGCGTTGCTCGGAGAAGGAGGTTTTGGGAAAGTTTACAAAGGATGGTTGCATGAGAAAACTCTGACACCGACCAAAGCTGGTTCTGGAATCATGGTAGCTATCAAAAAGTTGAATCCCGAAAGTATGCAGGGCCTTCAGGAGTGGCAGGAGTTCAACGCGAAAATATCAGATTTTGGTTTGGCGAAACTAGGCCCTCCTGCGGGAGATTCACACGTGACGACGAGAATCATAGGAACATATGGTTATGCTGCTCCAGAATACATTGCAACAGGTCACCTATATGTGAAAAGTGATGTTTATGGATTTGGTGTGGTGCTGCTTGAAATGCTGAAAGGGATGAGAGCACTTGATCAAAACCGGCCTTCAGGGCAGCAGAATCTGGTTGAATGGATTAAGCCTTATCTGTCTGATAAAACTAAGTTGAAAACTGATATTATGGATGAGAAGATCGAGGGTCAGTATTCAAGCAATGCAGCACTCAAAGCAGCACAACTTACTCTAAAATGTCTTGAAACTGACCCTAAACAACGTCCTTCCATGCAACAAGTTCTTCACACCTTAGAAACCATCCAAGCTATCAAACTTAGAAGGAGGAAAAGAACCAAACATTGCTCTAATAAGTTCGCAACTATCAACAATTTTCACTAG | 948 | 0.4483 | MGVCFSSPAGHRSLNSTFPQGSARGSRDLTVSTGSVEGKREVEVEVSEESGVVGSSSDSNSNGNNNKSDGSIVFRSLEMRKLKEFSFAELKAATRSFKSDALLGEGGFGKVYKGWLHEKTLTPTKAGSGIMVAIKKLNPESMQGLQEWQEFNAKISDFGLAKLGPPAGDSHVTTRIIGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLKGMRALDQNRPSGQQNLVEWIKPYLSDKTKLKTDIMDEKIEGQYSSNAALKAAQLTLKCLETDPKQRPSMQQVLHTLETIQAIKLRRRKRTKHCSNKFATINNFH | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g01740 | 315 | Pfam | Protein kinase domain | 152 | 285 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g01740 | 315 | ProSitePatterns | Protein kinases ATP-binding region signature. | 103 | 136 | IPR017441 | GO:0005524 | |
Viun2g01740 | 315 | SUPERFAMILY | Protein kinase-like (PK-like) | 83 | 295 | IPR011009 | - | |
Viun2g01740 | 315 | Gene3D | Phosphorylase Kinase; domain 1 | 74 | 151 | - | - | |
Viun2g01740 | 315 | PANTHER | OS01G0588500 PROTEIN-RELATED | 62 | 149 | - | - | |
Viun2g01740 | 315 | MobiDBLite | consensus disorder prediction | 50 | 70 | - | - | |
Viun2g01740 | 315 | ProSiteProfiles | Protein kinase domain profile. | 1 | 290 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g01740 | 315 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
Viun2g01740 | 315 | Gene3D | Transferase(Phosphotransferase) domain 1 | 152 | 305 | - | - | |
Viun2g01740 | 315 | MobiDBLite | consensus disorder prediction | 9 | 33 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g01740 | Viun-Chr2 | 26773086 | 26776141 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g01740 | 151 | 293 | Receptor kinase-like Gene Family | AT4G02010 | 46.154 | 7.63e-43 | 155 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Viun2g01740 | Pkinase | 1e-17 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g01740 | - | - | lsv:111889332 | 269.626 |