Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01740 ATGGGTGTCTGTTTTTCTTCCCCCGCTGGCCACCGATCACTCAACTCCACATTCCCTCAAGGTTCAGCGCGTGGAAGTAGGGACTTGACAGTGTCCACGGGGAGCGTGGAAGGAAAGCGTGAAGTTGAAGTTGAAGTTTCGGAGGAGTCTGGGGTTGTCGGAAGCAGCAGTGACAGTAACAGTAACGGTAACAATAATAAGAGTGATGGTAGCATTGTTTTTCGGAGTTTGGAAATGAGGAAGCTGAAGGAGTTTAGTTTCGCGGAGCTGAAAGCAGCTACGAGGAGTTTCAAGTCAGATGCGTTGCTCGGAGAAGGAGGTTTTGGGAAAGTTTACAAAGGATGGTTGCATGAGAAAACTCTGACACCGACCAAAGCTGGTTCTGGAATCATGGTAGCTATCAAAAAGTTGAATCCCGAAAGTATGCAGGGCCTTCAGGAGTGGCAGGAGTTCAACGCGAAAATATCAGATTTTGGTTTGGCGAAACTAGGCCCTCCTGCGGGAGATTCACACGTGACGACGAGAATCATAGGAACATATGGTTATGCTGCTCCAGAATACATTGCAACAGGTCACCTATATGTGAAAAGTGATGTTTATGGATTTGGTGTGGTGCTGCTTGAAATGCTGAAAGGGATGAGAGCACTTGATCAAAACCGGCCTTCAGGGCAGCAGAATCTGGTTGAATGGATTAAGCCTTATCTGTCTGATAAAACTAAGTTGAAAACTGATATTATGGATGAGAAGATCGAGGGTCAGTATTCAAGCAATGCAGCACTCAAAGCAGCACAACTTACTCTAAAATGTCTTGAAACTGACCCTAAACAACGTCCTTCCATGCAACAAGTTCTTCACACCTTAGAAACCATCCAAGCTATCAAACTTAGAAGGAGGAAAAGAACCAAACATTGCTCTAATAAGTTCGCAACTATCAACAATTTTCACTAG 948 0.4483 MGVCFSSPAGHRSLNSTFPQGSARGSRDLTVSTGSVEGKREVEVEVSEESGVVGSSSDSNSNGNNNKSDGSIVFRSLEMRKLKEFSFAELKAATRSFKSDALLGEGGFGKVYKGWLHEKTLTPTKAGSGIMVAIKKLNPESMQGLQEWQEFNAKISDFGLAKLGPPAGDSHVTTRIIGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLKGMRALDQNRPSGQQNLVEWIKPYLSDKTKLKTDIMDEKIEGQYSSNAALKAAQLTLKCLETDPKQRPSMQQVLHTLETIQAIKLRRRKRTKHCSNKFATINNFH 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01740 315 Pfam Protein kinase domain 152 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01740 315 ProSitePatterns Protein kinases ATP-binding region signature. 103 136 IPR017441 GO:0005524
Viun2g01740 315 SUPERFAMILY Protein kinase-like (PK-like) 83 295 IPR011009 -
Viun2g01740 315 Gene3D Phosphorylase Kinase; domain 1 74 151 - -
Viun2g01740 315 PANTHER OS01G0588500 PROTEIN-RELATED 62 149 - -
Viun2g01740 315 MobiDBLite consensus disorder prediction 50 70 - -
Viun2g01740 315 ProSiteProfiles Protein kinase domain profile. 1 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01740 315 MobiDBLite consensus disorder prediction 1 70 - -
Viun2g01740 315 Gene3D Transferase(Phosphotransferase) domain 1 152 305 - -
Viun2g01740 315 MobiDBLite consensus disorder prediction 9 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01740 Viun-Chr2 26773086 26776141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01740 151 293 Receptor kinase-like Gene Family AT4G02010 46.154 7.63e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Viun2g01740 Pkinase 1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01740 - - lsv:111889332 269.626