Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01739 ATGGGTGTCTGTTTTTCTTCCCCCGCTGGCCACCGATCACTCAACTCCACATTCCCTCAAGGTTCAGCGCGTGGAAGTAGGGACTTGACAGTGTCCACGGGGAGCGTGGAAGGAAAGCGTGAAGTTGAAGTTGAAGTTTCGGAGGAGTCTGGGGTTGTCGGAAGCAGCAGTGACAGTAACAGTAACGGTAACAATAATAAGAGTGATGGTAGCATTGTTTTTCGGAGTTTGGAAATGAGGAAGCTGAAGGAGTTTAGTTTCGCGGAGCTGAAAGCAGCTACGAGGAGTTTCAAGTCAGATGCGTTGCTCGGAGAAGGAGGTTTTGGGAAAGTTTACAAAGGATGGTTGCATGAGAAAACTCTGACACCGACCAAAGCTGGTTCTGGAATCATGGTAGCTATCAAAAAGTTGAATCCCGAAAGTATGCAGGGCCTTCAGGAGTGGCAGTCAGAAATAACGTTTTTGGGAACAGTTTCTCACCCAAACCTGGTGAAGCTTTTGGGTTACTGCTGTGACGATGTGGAGTTTCTCCTTGTGTACGAATTCATGCCAAAGGGAAGCTTGGAGACTCATCTATTTTGGAGAAATAATAACACAGAACCTTTGTCTTGGGACACTCGACTGAAAATAGCTATCGGTGCAGCTCGGGGTTTGGCTTATTTGCACACCTCGGATAAGCAAATCATATACAGAGATTTCAAAGCCTCTAATATACTACTTGATGAGGAGTTCAACGCGAAAATATCAGATTTTGGTTTGGCGAAACTAGGCCCTCCTGCGGGAGATTCACACGTGACGACGAGAATCATAGGAACATATGGTTATGCTGCTCCAGAATACATTGCAACAGGTCACCTATATGTGAAAAGTGATGTTTATGGATTTGGTGTGGTGCTGCTTGAAATGCTGAAAGGGATGAGAGCACTTGATCAAAACCGGCCTTCAGGGCAGCAGAATCTGGTTGAATGGATTAAGCCTTATCTGTCTGATAAAACTAAGTTGAAAACTGATATTATGGATGAGAAGATCGAGGGTCAGTATTCAAGCAATGCAGCACTCAAAGCAGCACAACTTACTCTAAAATGTCTTGAAACTGACCCTAAACAACGTCCTTCCATGCAACAAGTTCTTCACACCTTAGAAACCATCCAAGCTATCAAACTTAGAAGGAGGAAAAGAACCAAACATTGCTCTAATAAGTTCGCAACTATCAACAATTTTCACTAG 1227 0.4417 MGVCFSSPAGHRSLNSTFPQGSARGSRDLTVSTGSVEGKREVEVEVSEESGVVGSSSDSNSNGNNNKSDGSIVFRSLEMRKLKEFSFAELKAATRSFKSDALLGEGGFGKVYKGWLHEKTLTPTKAGSGIMVAIKKLNPESMQGLQEWQSEITFLGTVSHPNLVKLLGYCCDDVEFLLVYEFMPKGSLETHLFWRNNNTEPLSWDTRLKIAIGAARGLAYLHTSDKQIIYRDFKASNILLDEEFNAKISDFGLAKLGPPAGDSHVTTRIIGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLKGMRALDQNRPSGQQNLVEWIKPYLSDKTKLKTDIMDEKIEGQYSSNAALKAAQLTLKCLETDPKQRPSMQQVLHTLETIQAIKLRRRKRTKHCSNKFATINNFH 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01739 408 ProSitePatterns Protein kinases ATP-binding region signature. 103 136 IPR017441 GO:0005524
Viun2g01739 408 SUPERFAMILY Protein kinase-like (PK-like) 82 385 IPR011009 -
Viun2g01739 408 FunFam Serine/threonine-protein kinase BIK1 63 182 - -
Viun2g01739 408 MobiDBLite consensus disorder prediction 14 33 - -
Viun2g01739 408 FunFam Serine/threonine-protein kinase PBS1 183 398 - -
Viun2g01739 408 PANTHER OS01G0588500 PROTEIN-RELATED 62 384 - -
Viun2g01739 408 ProSiteProfiles Protein kinase domain profile. 97 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01739 408 Gene3D Phosphorylase Kinase; domain 1 81 182 - -
Viun2g01739 408 Pfam Protein tyrosine and serine/threonine kinase 100 380 IPR001245 GO:0004672|GO:0006468
Viun2g01739 408 Gene3D Transferase(Phosphotransferase) domain 1 183 405 - -
Viun2g01739 408 MobiDBLite consensus disorder prediction 50 70 - -
Viun2g01739 408 CDD STKc_IRAK 103 383 - -
Viun2g01739 408 MobiDBLite consensus disorder prediction 14 70 - -
Viun2g01739 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01739 Viun-Chr2 26773086 26776141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01739 85 380 Glycoside Hydrolase AT3G07070 48.822 1.61e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Viun2g01739 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01739 - - gmx:100778116 568.926