Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01727 ATGGGAGGCTTATTACACTTTTTTGAATTCAATCAGGGGAGGATGGCCAAGAAAGTTCTTGCTCGGAAGAGACATCATGGTGGCCTGGAAGCTCCTCGAAATAGTCTAGATCTGCAAGTACAAACACCTCAGAATTACTGCACACAAGGGGAATTATCATGCAAGTATCAAGTGGAAGAAGAGGGCAGGTCTGAGAATAATCGTTATTCAAACGTGGGTTCAATGAAAAAACTGATCAACGAGGAGCTATCCAAACAATCAAGCACCAGGCAAAATGCGCCAAGCCTTGTTGCAAGGTTGATGGGGATAGATACGATGCCATTAGACACTAAATATGTTGTCCCGTCAGATAAAAGAATGAGTGAAAACGTGGGGAAGAAGTCTTCAGAGAAAGGAGTGAGTCGAAGGGGTTCAGTTAGTTGGGGTTCTTCCAACTTTAATTCTTCGACCCAGATGGATTTTGAGTCATTATACGAAGACATGGATGTTGATGACAACGATGATGGATGGAACAAGAGTTTTGGAGAACCAAGGCGGCGGGATCATCCTCAGGAAGAGGAACTACAGAAATTCAAGAAAGAGTTTGAAGCGTATCAAGCAGCAAGGTTTCAAGAGTGTTCGAAGGTTGCTGAAATTGGTAGTGTTCCTAGACGATTGCTTGTTCAAGAAAACTCGAACAAGGAAAAGGTGATTCATAGTGATTTAGTTTTACATAGAGCAGGAGCAGGGAAACTTGCAGATCTTGATAGCCATTCATTCAAAACACCACCACCTGAAATTTATGGTTCAGAATACCGTGGTGACATGATGGAGTTAGTCCCAGCTACTCAAAGGAAAACCTTTCCTCCTAGGAGCAGAACACTGAGTAGAGACTTTGAGGAGTCCTTATTGATGAAATCTTGCAACAGATTAGACACGTCTGCTTCTCCCACCAGGATAGTTATCTTGAAGCCTGGTCCTGAGAGCATTAGCAACCATGAAGAGAATTGGACCATTTCAACAGGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAGATTTCTGTGGTTCGAGGGAGTGGAATTGAAACACCTTACAATGAAAAACCATCTGATCCTAAGCTAATAGCCCGACATATAGTAAAGCAAGTCAGAGAAAATGCTACTAGAGATGCTGACACAAATTTACTCCACTCTGAGTCAACAGGGTCGTTCAGAAGTGAAATGCAATTCAATGGAGCAACTTCCCCGGAAATTATCAGCAGAGATACCCGGAAGTTCTTGTCAGATAGGCTAAGAAATGTTGTGAGAAGTGAAGCACGAGCTGAATTTCCCGAGGGAAAATCAAGGTCACTTGCATTAGACAGGTATAAAGATGGACTAAAGCAAGGAGGGGATATTATGAAGTATGCAAGTAACTGGGAAATTTCCAAAGAGGACACAGAAATACAGACAGGTTCTTTCAGACATGAACTGGATGAAAATATATTTCTGCACAAGGAGTTGTCTCCAAGGAATCTTGTAAGATCCTTGTCTGCTCCTGTATCACGATCAGGAACATCATTTGGGAAGCTTCTTCTGGAGGACCGCCACATTTTAACTGGTGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCCGTTGATGTCAAGAAACGGAAAAAGGACAGATTTAATATTAAGGAACGAGTCTCCAATTTTAGATACAATCTTGCTTTAAGAGGGAGGCTTTTTGGTAGAAGGGTTCAATCAACGGTGGAATCACGCGCCAATGAGTATGGTCCCATGGTGAGAGATGTCACAAGTGGACCAACAGTTCTCATGAACTGTGGTGAGCGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCTGTATGCAGCAGCATCCATGAAGATTTTTGGAGGCGGACTGAATATTTAAGTCCAATATCAACTCCTGATGTGTCTTCAAGAGATGATACTGCTGTGCCACAGGTTTTCAGGGATATCAGCTCTGGTTTGAATGAACTAAGGAGGCAACTGAATCAACTTGAATCTGATGGTCCTGAGGACTTCACAATGAAACAGGAGGCCTCTGAGTCTGACTTGGATCAACTAGAGGATCCAGCGGAATCATACATAAGAGATCTACTTATTGCATCTGGACTGTACTTTGGTTCATGGGATAAGTCTTTGTTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCAGTTTATGAAGAAGTGGAAGAATCTCGTAGGAAATGGGTCAAGGAAAATGATGACAGCTGCATCAAGGATCAGAATGAGAATAAACCAGACCACAAAGTTTTGCTTGATCTGTTAAATGAGGCACTTTCAGTTGTTCTCGGACCTCCATTGACACTGTCCAGATTCAGAAGAAAATTAAGTAACTCTTCCATGTTGCTACCTTCTGGAAAGGAACTATTGAACTTAGTGTGGGACATTATCCGTGTTTCTATATATCCTCCATCTGACATATCTACTTATTCACTTGATACTTTGGTGGCTCAACACCTAGGATCCATCCCCTGGTCTGAACTAATAAACGATGAGATCAATATTTTGGAAAGAGATATAGAATGTCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATATGTTCTAAGATGAAGTGA 2697 0.4182 MGGLLHFFEFNQGRMAKKVLARKRHHGGLEAPRNSLDLQVQTPQNYCTQGELSCKYQVEEEGRSENNRYSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVVPSDKRMSENVGKKSSEKGVSRRGSVSWGSSNFNSSTQMDFESLYEDMDVDDNDDGWNKSFGEPRRRDHPQEEELQKFKKEFEAYQAARFQECSKVAEIGSVPRRLLVQENSNKEKVIHSDLVLHRAGAGKLADLDSHSFKTPPPEIYGSEYRGDMMELVPATQRKTFPPRSRTLSRDFEESLLMKSCNRLDTSASPTRIVILKPGPESISNHEENWTISTGTIQGRNSIEDFLEEVKERLKCELQGKIVKKISVVRGSGIETPYNEKPSDPKLIARHIVKQVRENATRDADTNLLHSESTGSFRSEMQFNGATSPEIISRDTRKFLSDRLRNVVRSEARAEFPEGKSRSLALDRYKDGLKQGGDIMKYASNWEISKEDTEIQTGSFRHELDENIFLHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAQIRRKLEAVETMSVDVKKRKKDRFNIKERVSNFRYNLALRGRLFGRRVQSTVESRANEYGPMVRDVTSGPTVLMNCGERHENSTEVPPSPASVCSSIHEDFWRRTEYLSPISTPDVSSRDDTAVPQVFRDISSGLNELRRQLNQLESDGPEDFTMKQEASESDLDQLEDPAESYIRDLLIASGLYFGSWDKSLLRGDTFAKPIGNSVYEEVEESRRKWVKENDDSCIKDQNENKPDHKVLLDLLNEALSVVLGPPLTLSRFRRKLSNSSMLLPSGKELLNLVWDIIRVSIYPPSDISTYSLDTLVAQHLGSIPWSELINDEINILERDIECLITDDLVEELTKDICSKMK 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01727 898 MobiDBLite consensus disorder prediction 167 184 - -
Viun2g01727 898 Coils Coil 676 696 - -
Viun2g01727 898 MobiDBLite consensus disorder prediction 114 145 - -
Viun2g01727 898 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 894 - -
Viun2g01727 898 Pfam Domain of unknown function (DUF4378) 721 888 IPR025486 -
Viun2g01727 898 MobiDBLite consensus disorder prediction 165 184 - -
Viun2g01727 898 Pfam DUF761-associated sequence motif 89 107 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01727 Viun-Chr2 26721979 26726857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01727 75 893 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.859 4.13e-152 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01727 - - gmx:100779720 1518.83