Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01718 ATGTCGTGTTCGTCGTCGTCGGGGTCGGAGGAAGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGGTACCACGCCGTCAGAGTCGGCGATCAGTTCGGCAGCGGCAGGTACATAGCGCAGAGAAAATTGGGTTGGGGTCAGTTCTCCACCGTCTGGCTTGCCTACGATACTAAAACTTCTTCATTTGTTGCACTCAAGATCCAGAAAAGTGCGGCTCAGTTTGTTCAGGCTGCCCTTCATGAGATTGATATTCTTTCATCCATTGCTGACCGTGACCCATCAAATTCAAAATTTGTAATTCAATTGATTGACAACTTTAAGCACAATGGTCCAAATGGACAGCATCTATGCATGGTCCTAGAGTTTCTGGGCGATAGCTTGCTTCGCTTGATCAAATATAACCGTTACAAAGGCCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGTGTTTTAGTTGGTTTGGACTACTTGCATACTGATCTTGGTATAATCCACTCTGACCTAAAACCTGAAAACATTCTTCTATGTTCAACCATTGATCCTGCCAAAGACCCTTTAAGATCTGGACTCTCCCCAATTCTGGAGCGACCTGAGGGAAACACAAATGGTGGAGTATCAAGTCTTATTGAGAAAAGGTTGAAAAGGAGAGCAAGGTCCGCAGTTGCTAAGATATCCGGAAGAAGAGGGACAATGGGAGAAGATGTTGCAAACACCGATAGAAACATTAATGGGATTGATGTGAGATGCAAGATAGTAGATTTTGGAAATGCTTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATTCAGACAAGACAGTACAGAGCACCTGAAGTTATACTGATATCTGGCTATTCTTTCCCTGTTGACATGTGGTCTTTTGCTTGCATTGTTTTTGAACTAGCCACTGGAGATATGTTGTTCACACCAAAGGGTGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGATTGCTATTGGAGGAGCTCAATCCAAGGATTACTTTGACAGGCATGGGGATCTAAAAAGGATTCGCAGGCTAAAATTCTGTCCACTAGACAAATTGCTGACTGATAAATATAAATTTTCAGCTAATGATGCTCGAGAGTTTTCAGAATTTCTTCTACCACTCTTTGATTTTGCCCCTGAGAAGCGACCAACTGCGAGACAGTGCCTGGAACATCCATGGCTGAACCCTCCAAATCAAACTGCTCAAGAAAAAGTGCATGCTGGAATGAGCAACCTTCAGATCTCACAGTCCAAGGCATAG 1311 0.4394 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVGDQFGSGRYIAQRKLGWGQFSTVWLAYDTKTSSFVALKIQKSAAQFVQAALHEIDILSSIADRDPSNSKFVIQLIDNFKHNGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLNKVREICKCVLVGLDYLHTDLGIIHSDLKPENILLCSTIDPAKDPLRSGLSPILERPEGNTNGGVSSLIEKRLKRRARSAVAKISGRRGTMGEDVANTDRNINGIDVRCKIVDFGNACWADKQFAEEIQTRQYRAPEVILISGYSFPVDMWSFACIVFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFCPLDKLLTDKYKFSANDAREFSEFLLPLFDFAPEKRPTARQCLEHPWLNPPNQTAQEKVHAGMSNLQISQSKA 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01718 436 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 205 - -
Viun2g01718 436 Gene3D Transferase(Phosphotransferase) domain 1 92 411 - -
Viun2g01718 436 FunFam Serine/threonine-protein kinase SRPK 116 411 - -
Viun2g01718 436 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01718 436 Pfam Protein kinase domain 250 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01718 436 FunFam Protein kinase superfamily protein 24 123 - -
Viun2g01718 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Viun2g01718 436 CDD STKc_SRPK 27 411 - -
Viun2g01718 436 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Viun2g01718 436 SUPERFAMILY Protein kinase-like (PK-like) 35 418 IPR011009 -
Viun2g01718 436 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Viun2g01718 436 ProSiteProfiles Protein kinase domain profile. 38 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01718 436 SMART serkin_6 38 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01718 Viun-Chr2 26687579 26691263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01718 4 413 EF-hand Containing Proteins AT5G22840 52.165 4.49e-169 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Viun2g01718 Pkinase 1.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01718 K08832 - gmx:100793851 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01718 2 26687579 26691263 Viun2g01718 2 26687579 26691263 ECH