Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01715 ATGAGTGGTGTTGGTGGTGGATGCCCCTGCCCCAGGGGTGGTACTGATGGTTCCATGGAGGATCCCAATGGGGATACGGTGGGGAATTTGAATCAGAATGCAGCGAAGCCTCCGAGGGACCATTCTGTTATGCGACATTTCAGCAGCTCTTCTTGGTCTGCAGAACCGGAATCAAATATTAGTATTACTGGACTTAAATCAAGCACAGAAAAAAAATCAGACTTTCCACTTGAAATTCGATCTGGAAGCTATTCTGATAAAGGACCAAAGCAGTACATGGAGGATGAATTCATATGCATTGATAGTCTTAGTGAATGTGACGGTCTAGGAGCAAACCTTCCTTCTCCTGCAGCATTTTACGGGGTATTTGATGGACATGGTGGCGTTGATGCAGCAGCATTTACAAGAAAGAACATCCTCAAGTTTATAGTTCAAGATGCTCATTTCCCATCTAACATTAAGAAAGCAATTAAGAGTGCATTTGTGAAGGCTGATCTTGCTTTTAGAGATGCGAGTTCTCTTGATAGCTCTTCAGGCACCACAGCTCTGATAGCCCTAACGTTGGGAAGTTCCATGCTGATTGCCAATGCAGGAGATTCTCGTGCTGTGTTGGGCAAACGAGGCAGAGCAGTTGAACTTTCCAAAGACCATAAACCAAATTGCACTTCTGAAAGATTAAGAATTGAAAAACTTGGTGGAGTGATCTACGATGGATACCTGAATGGCCAACTATCAGTGGCTCGTGCTCTTGGAGATTGGCACATAAAAGGCAGCAAAGGTTCTAAGAGTCCTTTAAGCTCGGAGCCAGAACTTGCTGATATGGTGCTGAGTGAAGAGGACGAGTTTTTGATAATGGGGTGTGATGGATTGTGGGATGTGATGAGCAGCCAGTGTGCTGTGACAATGGTGAGGAAGGAGATGATGCAGCATAATGATCCGAACAAATGTGCAAAAGTACTTGTTACTGAGGCCCTTCAACGCAACACTTGTGACAACCTCACAGTTGTGATTGTGTGTTTCTCCAAAGATCCACCTCCTAAAATTGAAATTCCTAGATCATATAGGAGGAGGAGTATTTCTGCTGAGGGCCTTGATCTTCTCAAGGGTGTTTTGAATGGTAGATGA 1125 0.4436 MSGVGGGCPCPRGGTDGSMEDPNGDTVGNLNQNAAKPPRDHSVMRHFSSSSWSAEPESNISITGLKSSTEKKSDFPLEIRSGSYSDKGPKQYMEDEFICIDSLSECDGLGANLPSPAAFYGVFDGHGGVDAAAFTRKNILKFIVQDAHFPSNIKKAIKSAFVKADLAFRDASSLDSSSGTTALIALTLGSSMLIANAGDSRAVLGKRGRAVELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELADMVLSEEDEFLIMGCDGLWDVMSSQCAVTMVRKEMMQHNDPNKCAKVLVTEALQRNTCDNLTVVIVCFSKDPPPKIEIPRSYRRRSISAEGLDLLKGVLNGR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01715 374 ProSiteProfiles PPM-type phosphatase domain profile. 80 340 IPR001932 -
Viun2g01715 374 SMART PP2C_4 70 338 IPR001932 -
Viun2g01715 374 MobiDBLite consensus disorder prediction 44 67 - -
Viun2g01715 374 Pfam Protein phosphatase 2C 87 332 IPR001932 -
Viun2g01715 374 SUPERFAMILY PP2C-like 74 341 IPR036457 -
Viun2g01715 374 Gene3D - 62 344 IPR036457 -
Viun2g01715 374 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Viun2g01715 374 FunFam Probable protein phosphatase 2C 22 65 343 - -
Viun2g01715 374 PANTHER PROTEIN PHOSPHATASE 2C 67 338 IPR015655 GO:0004722|GO:0006470
Viun2g01715 374 CDD PP2Cc 79 340 IPR001932 -
Viun2g01715 374 MobiDBLite consensus disorder prediction 22 36 - -
Viun2g01715 374 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01715 Viun-Chr2 26673528 26677299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01715 64 372 PP2C-type Phosphatase Gene Family AT3G51470 75.405 2.70e-173 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01715 K14803 - gmx:100786416 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01715 2 26673528 26677299 Viun2g01715 2 26673528 26677299 ECH