Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01714 ATGGCAAGACAGACGGTGGCGATAATAGGCCCACATAGTTCTGTAACAGCTCATGTCATAACTCATATTGCAAATGAGCTTCAAGTTCCTCTTCTGTCATTTACAGCTTTTGACCCTACTCTTTCTTCGCTTCAATTCCCATTCTTTATTAGAACTTGCCATAGTGATCTTTATCAAATGACTGCAATAGCAGACCTTGTTGACTACTATGGCTGGAAAGATGTTATCGCAGTCTTTCCTGATGATGATAATGGTAGAAATGGAATTAGCACATTAGGAGATAAGCTTGCAGAGAGGCGTTGCAAGATATCATATAAAGCAGCTTTGAGTCCCCAAGCATCTATGGAAGAGATTAGTAATGTGCTTGTGCAGGTGGCTCTGGCAGAATCACGGATAATAGTTGTTCATGGCAATACTCAACTTGGCCCTCAGGTGTTCACAGTTGCAAAGAATCTTGGGATGATGGGAACTGGTTATGTCTGGATAGCCACTGCTTTTCTCTCTGCTCTGCTTGATATCAACTATCCCCTCTCTCCCGATTCAATGGATGAAATTCAAGGAGTTCTTACACCACGTATCTACACGCCAAATTCAGAGCGCAGAAGAAGTTTTGTTTCTAGGTGGAAAAACTTGACCAGTGGAAATACTGCCAATGTCAAACTTGGATTGAGTTTTCTACCTCTCTATGCATATGACACTGTTTATGCACTTGCTCATGCTCTTGATGCATTTTTCAAAGAAGGTAACCGGATTACATTCTCAACTGATTCAAAGCTGTCTAACATACATGGAAACAACTTGAATCTTGAGGCCTTGAAAATCTTTAATGAAGGAAATCTGTTACGTAGAAAGATCTATGAGGTAAACATGACTGGTGTGTCAGGTCCATTCAAGTATGCATCCGATAGAAACCTTGCTAATCCTGCATATGAAATCATTAATGTGATTGGAACAGGAACTCGAAGGATTGGTTATTGGTCTAATCACTCTGGTTTATCAGTTGTTCCTCCAGAAACTCTTTATTCGAAACCAGCCAATCTGCCCAGGAAAAATCAAAAGCTGTTTCCTGTGATTTGGCCTGGAAACACAGATGAAAGACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGCTCTTAAAGATTGGAGTACCAAGAGGTGTTAGTTACCAGGAGTTTGTCTCACAGATAAAAGGCACTGACATGTTTGAGGGATTCTGCATTGATGTATTTCTTGCTGCAGTGAATCTGTTGCCTTATGCTGTCCCCTACAGGTTCATCTCATACGGGGATGGTAAGAACAATCCTAGTATGACTGAGCTTGTCCGTCTGATCACAACGGGTGAATTTGATGGTGCAGTAGGTGACATTGCAATTACTACAGAAAGAACAAGGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTCTTGTGGTAGTAGCACCCATTGGGCAGGCAGAATCCAATGCTTTGGCCTTTTTGGCCCCTTTTACACCAAAGATGTGGTTTGTGACAGCTGCCTTTTTCATATTAGTGGGAGCTGTTGTTTGGATTTTGGAGCATAGGGTGAATGATGAATTTAGAGGACCACCCAAAAAGCAAGTAGTCACCGTTTTATGGTTTAGTTTTTCAACAATGTTCTTTTCCCACAGGGAAAATACAGTGAGCACACTTGGTCGTGTAGTGTTGATTATATGGTTATTTGTAGTTCTTATAATTAACTCAAGTTATACGGCAAGTCTGACCTCAATCCTCACAGTGCAACAACTTTATTCTCCCATTAAAGGCATTGAAAGTCTAGTAAACAGCAAAGTGCCTATCGGCTACACGCAGGGTTCTTTTGCAAAAAACTACTTAGTTCAGGAAATTCATATTGAGGAGTCTAGGCTAGTTCCTCTGACAACACCAGAAGAAATTGCTAAAGCACTGAAAAATGGTCCCGAAAATGGGGGTGTTGCTGCTTACATTGACGAGCGTGCCTACACTGACATCTTCCTCTCCAGCCGTTGTGATTTAACTGTCGTAGGTCAGGAGTTCACCAGAAATGGTTGGGGATTTGCGTTTCCACGGGACTCGCCATTAGCAGTTGATTTGTCAACTGCCATATTGCAGATGATAGATAATGGAGATTTGCAAAGGATCCATGACAAGTGGCTTTTGAGTAGTGCTTGCTTATCACAAGGGGCAAAGCTTGAAGTGGAAAGACTCCAACTTAGAAGCTTTTGGGGGCTCTATGCGATCTGTGGAGTTGCGTGCTTGCTTGCACTCTTCATGTATCTTATACAGATTTTGAGGCAATACCAGAAGCACCACTCAGAGGAACCCGAGTCCATTGACGGCCAAAGCTTAGGATCATCATCAAGATCTTCACGTCTCAAGACTTTCCTTTCATTTGCAGATGAGAAAGAAGAGACTGTGAAGAGCCGCTCCAAGAGAAGAAAAATGGAGAGGATCTCATACCGAAGCACTGAAGGAAGCACATCCATCAGCTCCAATAAGGAAATTGCTTCACGCAGAAGTGAATATGCTAGTGAACTATTATGA 2544 0.421 MARQTVAIIGPHSSVTAHVITHIANELQVPLLSFTAFDPTLSSLQFPFFIRTCHSDLYQMTAIADLVDYYGWKDVIAVFPDDDNGRNGISTLGDKLAERRCKISYKAALSPQASMEEISNVLVQVALAESRIIVVHGNTQLGPQVFTVAKNLGMMGTGYVWIATAFLSALLDINYPLSPDSMDEIQGVLTPRIYTPNSERRRSFVSRWKNLTSGNTANVKLGLSFLPLYAYDTVYALAHALDAFFKEGNRITFSTDSKLSNIHGNNLNLEALKIFNEGNLLRRKIYEVNMTGVSGPFKYASDRNLANPAYEIINVIGTGTRRIGYWSNHSGLSVVPPETLYSKPANLPRKNQKLFPVIWPGNTDERPRGWVFPNNGRLLKIGVPRGVSYQEFVSQIKGTDMFEGFCIDVFLAAVNLLPYAVPYRFISYGDGKNNPSMTELVRLITTGEFDGAVGDIAITTERTRMVDFTQPYIESGLVVVAPIGQAESNALAFLAPFTPKMWFVTAAFFILVGAVVWILEHRVNDEFRGPPKKQVVTVLWFSFSTMFFSHRENTVSTLGRVVLIIWLFVVLIINSSYTASLTSILTVQQLYSPIKGIESLVNSKVPIGYTQGSFAKNYLVQEIHIEESRLVPLTTPEEIAKALKNGPENGGVAAYIDERAYTDIFLSSRCDLTVVGQEFTRNGWGFAFPRDSPLAVDLSTAILQMIDNGDLQRIHDKWLLSSACLSQGAKLEVERLQLRSFWGLYAICGVACLLALFMYLIQILRQYQKHHSEEPESIDGQSLGSSSRSSRLKTFLSFADEKEETVKSRSKRRKMERISYRSTEGSTSISSNKEIASRRSEYASELL 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01714 847 PRINTS Metabotropic glutamate GPCR signature 40 59 IPR000337 GO:0004930|GO:0007186|GO:0016020
Viun2g01714 847 PRINTS Metabotropic glutamate GPCR signature 8 34 IPR000337 GO:0004930|GO:0007186|GO:0016020
Viun2g01714 847 PRINTS Metabotropic glutamate GPCR signature 481 503 IPR000337 GO:0004930|GO:0007186|GO:0016020
Viun2g01714 847 PRINTS Metabotropic glutamate GPCR signature 59 75 IPR000337 GO:0004930|GO:0007186|GO:0016020
Viun2g01714 847 PRINTS Metabotropic glutamate GPCR signature 75 92 IPR000337 GO:0004930|GO:0007186|GO:0016020
Viun2g01714 847 MobiDBLite consensus disorder prediction 821 837 - -
Viun2g01714 847 CDD GluR_Plant 379 719 - -
Viun2g01714 847 SUPERFAMILY Periplasmic binding protein-like II 356 721 - -
Viun2g01714 847 Gene3D - 666 726 - -
Viun2g01714 847 Pfam Receptor family ligand binding region 3 317 IPR001828 -
Viun2g01714 847 MobiDBLite consensus disorder prediction 803 847 - -
Viun2g01714 847 Pfam Bacterial extracellular solute-binding proteins, family 3 434 719 IPR001638 -
Viun2g01714 847 SUPERFAMILY Periplasmic binding protein-like I 3 371 IPR028082 -
Viun2g01714 847 FunFam Glutamate receptor 490 620 - -
Viun2g01714 847 Gene3D - 374 490 - -
Viun2g01714 847 Pfam Ligand-gated ion channel 720 752 IPR001320 GO:0015276|GO:0016020
Viun2g01714 847 Gene3D - 1 307 - -
Viun2g01714 847 PIRSF IGluLR_plant 1 845 IPR017103 -
Viun2g01714 847 FunFam Glutamate receptor 374 490 - -
Viun2g01714 847 FunFam Glutamate receptor 616 723 - -
Viun2g01714 847 SMART GluR_14 380 721 IPR001320 GO:0015276|GO:0016020
Viun2g01714 847 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 792 IPR015683 -
Viun2g01714 847 FunFam Glutamate receptor 55 211 - -
Viun2g01714 847 Gene3D - 55 332 - -
Viun2g01714 847 Gene3D - 491 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01714 Viun-Chr2 26665134 26669141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01714 1 819 Ion Channels AT3G51480 58.902 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01714 K05387 - gmx:100793320 1469.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01714 2 26665134 26669141 Viun2g01714 2 26665134 26669141 ECH