LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun2g01714	ATGGCAAGACAGACGGTGGCGATAATAGGCCCACATAGTTCTGTAACAGCTCATGTCATAACTCATATTGCAAATGAGCTTCAAGTTCCTCTTCTGTCATTTACAGCTTTTGACCCTACTCTTTCTTCGCTTCAATTCCCATTCTTTATTAGAACTTGCCATAGTGATCTTTATCAAATGACTGCAATAGCAGACCTTGTTGACTACTATGGCTGGAAAGATGTTATCGCAGTCTTTCCTGATGATGATAATGGTAGAAATGGAATTAGCACATTAGGAGATAAGCTTGCAGAGAGGCGTTGCAAGATATCATATAAAGCAGCTTTGAGTCCCCAAGCATCTATGGAAGAGATTAGTAATGTGCTTGTGCAGGTGGCTCTGGCAGAATCACGGATAATAGTTGTTCATGGCAATACTCAACTTGGCCCTCAGGTGTTCACAGTTGCAAAGAATCTTGGGATGATGGGAACTGGTTATGTCTGGATAGCCACTGCTTTTCTCTCTGCTCTGCTTGATATCAACTATCCCCTCTCTCCCGATTCAATGGATGAAATTCAAGGAGTTCTTACACCACGTATCTACACGCCAAATTCAGAGCGCAGAAGAAGTTTTGTTTCTAGGTGGAAAAACTTGACCAGTGGAAATACTGCCAATGTCAAACTTGGATTGAGTTTTCTACCTCTCTATGCATATGACACTGTTTATGCACTTGCTCATGCTCTTGATGCATTTTTCAAAGAAGGTAACCGGATTACATTCTCAACTGATTCAAAGCTGTCTAACATACATGGAAACAACTTGAATCTTGAGGCCTTGAAAATCTTTAATGAAGGAAATCTGTTACGTAGAAAGATCTATGAGGTAAACATGACTGGTGTGTCAGGTCCATTCAAGTATGCATCCGATAGAAACCTTGCTAATCCTGCATATGAAATCATTAATGTGATTGGAACAGGAACTCGAAGGATTGGTTATTGGTCTAATCACTCTGGTTTATCAGTTGTTCCTCCAGAAACTCTTTATTCGAAACCAGCCAATCTGCCCAGGAAAAATCAAAAGCTGTTTCCTGTGATTTGGCCTGGAAACACAGATGAAAGACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGCTCTTAAAGATTGGAGTACCAAGAGGTGTTAGTTACCAGGAGTTTGTCTCACAGATAAAAGGCACTGACATGTTTGAGGGATTCTGCATTGATGTATTTCTTGCTGCAGTGAATCTGTTGCCTTATGCTGTCCCCTACAGGTTCATCTCATACGGGGATGGTAAGAACAATCCTAGTATGACTGAGCTTGTCCGTCTGATCACAACGGGTGAATTTGATGGTGCAGTAGGTGACATTGCAATTACTACAGAAAGAACAAGGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTCTTGTGGTAGTAGCACCCATTGGGCAGGCAGAATCCAATGCTTTGGCCTTTTTGGCCCCTTTTACACCAAAGATGTGGTTTGTGACAGCTGCCTTTTTCATATTAGTGGGAGCTGTTGTTTGGATTTTGGAGCATAGGGTGAATGATGAATTTAGAGGACCACCCAAAAAGCAAGTAGTCACCGTTTTATGGTTTAGTTTTTCAACAATGTTCTTTTCCCACAGGGAAAATACAGTGAGCACACTTGGTCGTGTAGTGTTGATTATATGGTTATTTGTAGTTCTTATAATTAACTCAAGTTATACGGCAAGTCTGACCTCAATCCTCACAGTGCAACAACTTTATTCTCCCATTAAAGGCATTGAAAGTCTAGTAAACAGCAAAGTGCCTATCGGCTACACGCAGGGTTCTTTTGCAAAAAACTACTTAGTTCAGGAAATTCATATTGAGGAGTCTAGGCTAGTTCCTCTGACAACACCAGAAGAAATTGCTAAAGCACTGAAAAATGGTCCCGAAAATGGGGGTGTTGCTGCTTACATTGACGAGCGTGCCTACACTGACATCTTCCTCTCCAGCCGTTGTGATTTAACTGTCGTAGGTCAGGAGTTCACCAGAAATGGTTGGGGATTTGCGTTTCCACGGGACTCGCCATTAGCAGTTGATTTGTCAACTGCCATATTGCAGATGATAGATAATGGAGATTTGCAAAGGATCCATGACAAGTGGCTTTTGAGTAGTGCTTGCTTATCACAAGGGGCAAAGCTTGAAGTGGAAAGACTCCAACTTAGAAGCTTTTGGGGGCTCTATGCGATCTGTGGAGTTGCGTGCTTGCTTGCACTCTTCATGTATCTTATACAGATTTTGAGGCAATACCAGAAGCACCACTCAGAGGAACCCGAGTCCATTGACGGCCAAAGCTTAGGATCATCATCAAGATCTTCACGTCTCAAGACTTTCCTTTCATTTGCAGATGAGAAAGAAGAGACTGTGAAGAGCCGCTCCAAGAGAAGAAAAATGGAGAGGATCTCATACCGAAGCACTGAAGGAAGCACATCCATCAGCTCCAATAAGGAAATTGCTTCACGCAGAAGTGAATATGCTAGTGAACTATTATGA	2544	0.421	MARQTVAIIGPHSSVTAHVITHIANELQVPLLSFTAFDPTLSSLQFPFFIRTCHSDLYQMTAIADLVDYYGWKDVIAVFPDDDNGRNGISTLGDKLAERRCKISYKAALSPQASMEEISNVLVQVALAESRIIVVHGNTQLGPQVFTVAKNLGMMGTGYVWIATAFLSALLDINYPLSPDSMDEIQGVLTPRIYTPNSERRRSFVSRWKNLTSGNTANVKLGLSFLPLYAYDTVYALAHALDAFFKEGNRITFSTDSKLSNIHGNNLNLEALKIFNEGNLLRRKIYEVNMTGVSGPFKYASDRNLANPAYEIINVIGTGTRRIGYWSNHSGLSVVPPETLYSKPANLPRKNQKLFPVIWPGNTDERPRGWVFPNNGRLLKIGVPRGVSYQEFVSQIKGTDMFEGFCIDVFLAAVNLLPYAVPYRFISYGDGKNNPSMTELVRLITTGEFDGAVGDIAITTERTRMVDFTQPYIESGLVVVAPIGQAESNALAFLAPFTPKMWFVTAAFFILVGAVVWILEHRVNDEFRGPPKKQVVTVLWFSFSTMFFSHRENTVSTLGRVVLIIWLFVVLIINSSYTASLTSILTVQQLYSPIKGIESLVNSKVPIGYTQGSFAKNYLVQEIHIEESRLVPLTTPEEIAKALKNGPENGGVAAYIDERAYTDIFLSSRCDLTVVGQEFTRNGWGFAFPRDSPLAVDLSTAILQMIDNGDLQRIHDKWLLSSACLSQGAKLEVERLQLRSFWGLYAICGVACLLALFMYLIQILRQYQKHHSEEPESIDGQSLGSSSRSSRLKTFLSFADEKEETVKSRSKRRKMERISYRSTEGSTSISSNKEIASRRSEYASELL	847

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun2g01714	847	PRINTS	Metabotropic glutamate GPCR signature	40	59	IPR000337	GO:0004930\|GO:0007186\|GO:0016020
	Viun2g01714	847	PRINTS	Metabotropic glutamate GPCR signature	8	34	IPR000337	GO:0004930\|GO:0007186\|GO:0016020
	Viun2g01714	847	PRINTS	Metabotropic glutamate GPCR signature	481	503	IPR000337	GO:0004930\|GO:0007186\|GO:0016020
	Viun2g01714	847	PRINTS	Metabotropic glutamate GPCR signature	59	75	IPR000337	GO:0004930\|GO:0007186\|GO:0016020
	Viun2g01714	847	PRINTS	Metabotropic glutamate GPCR signature	75	92	IPR000337	GO:0004930\|GO:0007186\|GO:0016020
	Viun2g01714	847	MobiDBLite	consensus disorder prediction	821	837	-	-
	Viun2g01714	847	CDD	GluR_Plant	379	719	-	-
	Viun2g01714	847	SUPERFAMILY	Periplasmic binding protein-like II	356	721	-	-
	Viun2g01714	847	Gene3D	-	666	726	-	-
	Viun2g01714	847	Pfam	Receptor family ligand binding region	3	317	IPR001828	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun2g01714	Viun-Chr2	26665134	26669141	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun2g01714	1	819	Ion Channels	AT3G51480	58.902	0.0	1028

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun2g01714	K05387		-	gmx:100793320	1469.52

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun2g01714	2	26665134	26669141	Viun2g01714	2	26665134	26669141	ECH

Showing 1 to 1 of 1 entries