Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01711 ATGAATGCTTCCTTTTCAAGCTCTGCGCTTTCCCTATTTCTTCTCCTTTTTCTCTTCTTCAGCTTTTCCACCTCACAAACCCAACTCTTGCTGTCCCCTTCTCTGCCCTCAGTTAAACCGGCCACCGCACTCGTCGCCGCCCTGGATGGTACCGTGTATTTGGTGGATAGTGATTCTGGGAGGGTCTTTTGGTCTTTTTCAACTGGATCTCCAATCTACTATTCCTATCATGTTCCCATCAACAACCCTAGCCACAACTTCACAGCCTTCGTTGAATGTGGAGATGATTGGGAATTAATCGTCCACGATGCTCACTTGGGTAAACAGAGATTATCGAAATCTATTGAAGAGTATGTTGCTTCTACCCCTATCAAGACAGAGGATGGAGCATCTGTATTTGGTCACAAGAGAACCACTATGTATGTAGTTAATGCTAAAACTGGAGGGCTATTCCGAAGCTACTCTGAACATGATCATGCTTCTAATGCGGTGTCGGGTTATGATGACCGGTTGCATGTTGCAAGCACGAAGGATAATGTGCTTGTTGATCCTGCTCAGCTGAATCCACCCGAGTTCTTGCTTGAGATAACTAGGACGGATTATACTTTGCAATCCGTTGTTCCTGGTTCTGGAATAGTTTTGTGGACCATGAAAGTGGCTGAATTTAAGGCTGCATTGGTTTGCTCACATACTGAAAATTCTTCTGGAAGGATTTCATTAGATGCAGAGGATGGGTATGTTTTCGACGGTGGCTTAGATTTTGCTATGCCCTATGCATGTTGGGACATGAAACTGCATGAAGTATACCGCCAACGCAAGAAATTTTTTATAGAACCTGCTGACCCTGAGAGATTGTCTGAGGTTTATAAAAAAGTTCCATTTCATTCTTCAGAGCTCATGCTTCCATCACAACCAGGTACAGATAAATCTGTCCTAGGCCGGGAGGGAAATCTGATGCTATCTCTGCCTATGCCAAATCCTTTGCCTTCTTTGCCAGACAAAACTGGCTTCTATGAGGGCAATGATAATGTACCTATGCTCCCTCAGTCTCTTATGGAGACCACTACTGGAGAAGTTGATCCAGGCAGGGTGAATAACTGGTCAAAAACAATACCTCTTGTATTATTTACCATCTTTCTTGGTTCTTTTATTATCTATAACTCTCTTGTCTTTACAAATAAAGACCAGAACAGGGAGACAAATTCAAAAAGTCCACCTCCTAAGAAGAAGAAAGCTCGCAAGTCAATAAAGAACAACATCATTGCTGTCACACAGAATAAGCAATCGTTATTGGCCCAGGAGGGGGGCACATTCACACTTAATGAAACAAACTCCAGTACGCAGGTGCAACTTGATGGACGGAGGATAGGTAAACTGTTTGTATCTAATAAAGAAATTGCCAAGGGAAGCAATGGTACTGTTGTCCGTGAGGGGACATACGAAGGTCGGACAGTTGCTGTCAAACGTCTTGTTCAAAGTCATCATGATGTAGCCCATAAAGAAATCCAAAATCTCATTGCATCTGACAGGCATCCAAACATTGTCCGATGGTATGGGGTGGAATGCGATCATGATTTTGTTTATCTTGCTCTGGAACGCTGTACATGCAACTTGGACGATTTGATTCATTTGCACGCTGATATATCAGAAAATCCAGCAGTTAGAACTTCTCAAATGCGAACAGAGGAGAATGATATGCACTATCTTTGGAAAACAAATGGTTTTCCATCACCTCTGTTACTGAAACTGATGAGGGATATAGTTTCTGGGCTTGTTCATTTGCATGAACTAGGGATAATCCATCGGGATTTGAAACCTCAAAATGTTTTGATAATAAAAGAAAGATTATTGGTTGCAAAGCTTTCTGACATGGGAATTAGCAAACGTCTTCTCGAAGACATGTCTTCTCTAGGTGAAAGTGTTACGGGCTGTGGCAGTTCAGGCTGGCAAGCTCCAGAGCAACTTGTTCAAGGGCGTCAAACACGAGCTGTGGATTTATTTAGTTTAGGATGTGTCCTCTTTTTTTGCATGACTGCAGGAAGGCATCCATTTGGAGAGCGGCTTGAACGTGATGTCAATATTGTTAAAAATCAAAAAGATCTGTTCTTAGTGGAGTTTATTCCTGAAGCCGAGGATCTTATTTCTTGTTTGTTAAACCCTAATCCTGATCGTAGGCCAATGGCGATTGAAGTATTGCAACATCCTCTCTTTTGGAGCTCTGAGATGAAACTTTCATTTTTGCGTGACGTAAGTGATAGGGTGGAACTTGAAGATAGAGAATCTGTTTCTGATCTTTTGAAGTCATTAGAAAGCATTGCTCCACGGGCTTTAGGTGCAAAATGGGATGAGAAGCTAGATCCTGATTTCATCACTAACATTGGTCGATACCGGAGATATAAATTTGACAGTGTGCGGGACTTGTTGAGGGTCATGAGAAATAAGCTAAATCATTACAGGGAACTGCCTCAAGAAATCCAGGAACTGATAGGACCTGTTCCGGAAGGATTCAATGACTACTTTGCAAGTCGATTCCCAAGGCTCTTGATTGAAGTGTACAAAGTTATATACAGAAATTGCAAGAACGATGAATGTTTTCAAAGATATTTTAGATACATTAACTAG 2622 0.4188 MNASFSSSALSLFLLLFLFFSFSTSQTQLLLSPSLPSVKPATALVAALDGTVYLVDSDSGRVFWSFSTGSPIYYSYHVPINNPSHNFTAFVECGDDWELIVHDAHLGKQRLSKSIEEYVASTPIKTEDGASVFGHKRTTMYVVNAKTGGLFRSYSEHDHASNAVSGYDDRLHVASTKDNVLVDPAQLNPPEFLLEITRTDYTLQSVVPGSGIVLWTMKVAEFKAALVCSHTENSSGRISLDAEDGYVFDGGLDFAMPYACWDMKLHEVYRQRKKFFIEPADPERLSEVYKKVPFHSSELMLPSQPGTDKSVLGREGNLMLSLPMPNPLPSLPDKTGFYEGNDNVPMLPQSLMETTTGEVDPGRVNNWSKTIPLVLFTIFLGSFIIYNSLVFTNKDQNRETNSKSPPPKKKKARKSIKNNIIAVTQNKQSLLAQEGGTFTLNETNSSTQVQLDGRRIGKLFVSNKEIAKGSNGTVVREGTYEGRTVAVKRLVQSHHDVAHKEIQNLIASDRHPNIVRWYGVECDHDFVYLALERCTCNLDDLIHLHADISENPAVRTSQMRTEENDMHYLWKTNGFPSPLLLKLMRDIVSGLVHLHELGIIHRDLKPQNVLIIKERLLVAKLSDMGISKRLLEDMSSLGESVTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVKNQKDLFLVEFIPEAEDLISCLLNPNPDRRPMAIEVLQHPLFWSSEMKLSFLRDVSDRVELEDRESVSDLLKSLESIAPRALGAKWDEKLDPDFITNIGRYRRYKFDSVRDLLRVMRNKLNHYRELPQEIQELIGPVPEGFNDYFASRFPRLLIEVYKVIYRNCKNDECFQRYFRYIN 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01711 873 Gene3D Transferase(Phosphotransferase) domain 1 559 739 - -
Viun2g01711 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Viun2g01711 873 SMART PGNneu 802 856 - -
Viun2g01711 873 SUPERFAMILY Protein kinase-like (PK-like) 453 755 IPR011009 -
Viun2g01711 873 Pfam Protein kinase domain 462 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01711 873 ProSiteProfiles Protein kinase domain profile. 460 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01711 873 Pfam Ribonuclease 2-5A 743 869 IPR010513 GO:0004540|GO:0006397
Viun2g01711 873 MobiDBLite consensus disorder prediction 396 415 - -
Viun2g01711 873 ProSiteProfiles KEN domain profile. 740 871 IPR010513 GO:0004540|GO:0006397
Viun2g01711 873 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 41 216 IPR011047 -
Viun2g01711 873 PANTHER IRE1-RELATED 110 870 IPR045133 GO:0004521|GO:0004674|GO:0030968
Viun2g01711 873 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 452 532 - -
Viun2g01711 873 SMART serkin_6 460 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01711 873 CDD RNase_Ire1 741 869 - -
Viun2g01711 873 Gene3D Phosphorylase Kinase; domain 1 445 532 - -
Viun2g01711 873 Gene3D KEN domain 740 872 IPR038357 -
Viun2g01711 873 SMART ire1_9 36 67 IPR018391 -
Viun2g01711 873 SMART ire1_9 123 155 IPR018391 -
Viun2g01711 873 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 561 739 - -
Viun2g01711 873 Gene3D - 22 281 IPR015943 GO:0005515
Viun2g01711 873 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 741 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01711 Viun-Chr2 26657935 26664615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01711 486 736 MAP Kinase Kinase Kinase AT3G06030 27.451 6.83e-20 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Viun2g01711 Pkinase 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01711 K08852 - gmx:100785363 1255.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01711 2 26657935 26664615 Viun2g01711 2 26657935 26664615 ECH