Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01705 ATGCAACCTATTAATACCTACCTCAATTATTTAACCCCCCAAACCCAAAACCCAAAACTTCACTCTCTCTTTCTCTCACACTCTTATTCTTTCAATTCAACACCTTTCTTAACAAGAGATACACACACTCTCACACAAATGACGCGCATACTCAGAATTCTCAAATCTGCCGACAACGCCTCCGCGATGACAGCGGCGGCTCCGCCGCCGGAGGCGGTGGCCCTGGAGTCTGATTTCGTGGTGATTCTGGCGGCGCTTCTGTGCGCTTTAATCTGCGTGGTGGGACTAGTGGCCGTGGCGCGGTGCGCGTGGCTCCGGCGAGGGCCAGGAGGAGGAAACTCGCCGCGGCAGGCGGTGGTGAACAAGGGTCTGAAGAAAAAGGTGCTGCAGTCGCTGCCGAGGTTTGCGTACGTGGACAGCAACCCGAGCAAGTGGGTGGCGACGTCGGAATGCGCGATTTGCCTCGGTGATTTCGCCGCCGGCGACGAGATTCGGGTTCTGCCGCAGTGCGGCCACGGCTTCCACGTGTCCTGCATCGACAGGTGGCTCGGGTCCCACTCCTCCTGCCCTTCCTGCCGCCAGGTCCTCGCCGTCGCCAGGTGTCAGAAGTGCGGCCGCTTTCCGGCCACCGCCTCAAGAAGCGGCGCCAGCGAGCCCGAATTGAAGTCTAGAGAAGACAGCAATGCTGCTTCGATAAGTAATTGCAATAATAACAACGGTGATGGCGGTGGAAGTGGTAATCACGCGAATCATCACCATAGCCATCACTCGAACAGTGGGTTCTTGCCCTGA 792 0.5732 MQPINTYLNYLTPQTQNPKLHSLFLSHSYSFNSTPFLTRDTHTLTQMTRILRILKSADNASAMTAAAPPPEAVALESDFVVILAALLCALICVVGLVAVARCAWLRRGPGGGNSPRQAVVNKGLKKKVLQSLPRFAYVDSNPSKWVATSECAICLGDFAAGDEIRVLPQCGHGFHVSCIDRWLGSHSSCPSCRQVLAVARCQKCGRFPATASRSGASEPELKSREDSNAASISNCNNNNGDGGGSGNHANHHHSHHSNSGFLP 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01705 263 MobiDBLite consensus disorder prediction 226 245 - -
Viun2g01705 263 MobiDBLite consensus disorder prediction 209 263 - -
Viun2g01705 263 Pfam Ring finger domain 150 193 IPR001841 -
Viun2g01705 263 SMART ring_2 151 192 IPR001841 -
Viun2g01705 263 CDD RING-H2_EL5-like 150 193 - -
Viun2g01705 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 198 IPR013083 -
Viun2g01705 263 ProSiteProfiles Zinc finger RING-type profile. 151 193 IPR001841 -
Viun2g01705 263 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 66 205 - -
Viun2g01705 263 SUPERFAMILY RING/U-box 130 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01705 Viun-Chr2 26614836 26615883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01705 47 226 C3H Transcription Factor Family AT1G76410 56.150 1.51e-61 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01705 - - vun:114170353 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01705 2 26614836 26615883 Viun2g01705 2 26614836 26615883 ECH
Viun2g01705 2 26614836 26615883 Viun9g01832 9 27887855 27889007 ECH