Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01691 ATGGAGTTTGAGCCTTTGAGTCTAAGCAACGAGGTCATTGAATTTGATATGATTGGTTTGGGGTACGATGCTACCATTGACATGGAGCACCCTGTTGAGGATGGTGAGGACCTTGTTAATATTGATTATAGTCCAGCTGCTGCTAATTCTGTTCTTGCTGCTGGTGTGGGGCCTCACATTTTTGGAGGGGACACTAACCTTGAACCTTGTCAAGGAATGGACTTTGAATCGGAAGAGGCTGCAAAGGCGTTCTACAATTCCTACGCTCGCCGTGTTGGCTTTAGCACGCGGGTGAGCATGTCTCGGCGCTCCAGGCGTGACGGTTCTATAATTCAGAGGTCCTTTGTGTGTGCCAAGGAAGGTTTTCGTGTGGAGAAGGAGAAGCATTTGGTCGATGGCAGAGTCAAGCGGCCACGTGCCGAAACCCGCGTTGGTTGCAAAGCCATGTTGGTTGTGAAAATTCAAGATTCTGGCAGATGGGTTGTTTCTTCATTTGTCAGAGAACATAATCATGACTTGGTTCCACCTGATAAGGTGCATTGCCTTCGTTCTCATCGTCATGTTGCGGGTCCGGCTAAGTCATTGATTGATACTTTGCAGAGTGCTGGAATAGGCCCAAGTGGAATAATGTCTGCTCTGATAAAAGAATACGGTGGAATTAGCAATATTGGTTTCACTGAGCGTGACTGTAGAAATTATATGAGAAGTAGTAGGCAAAGGACCCTTGGAGGTGACACTCAGATCCTTTTGGATTACTTGAAGAGCAAACAAGCAGAGAATCCTTCATTTTTCTATGATGTACAAGGTGACGATGATCACTGCATGAGTAATATCCTCTGGGTTGATCCCAAGGCAAGGACTAATTATACTTACTTCGGAGACACTGTCACCTTTGATACAACATATAGGTCTAACCGCTATAGATTACCTTTTGCACCTTTCACTGGCATAAATCATCATGGACAGCCTGTATTGTTTGGTTGTGCTCTCCTGATAAATGAATCCGAGGCATCTTTTGTCTGGCTTTTCAAAACCTGGCTTGAAGCAATGTCAGGTAGACCTCCAGTTTCAATTACTACTGATCATGATAGGGTGATCTGTGCAGCCATCAACCATGTATTTCCCGGTACCCGGCACCGATTTTGTAAGTGGCACATTTTTAAGGAGTGCCAAGAGAAGTTGTCTCATGTGCTTTCTGAACATCATAATTTTGAAGCTGACCTGCATAAATGCATTAACCTGACCGAGTCCATTGAGGAGTTTGAGTCTTGTTGGACCTGTCTAACTGATAGGTATGATCTCCAGAAACATGAATGGCTCCAATCAATATACAATGATAGGCGGCAGTGGGTACCGGTGTACTTGAGGGATACATTTTTTGCAGAAATGTCAATAACACAGCGAAGTGATAACATTAACTCTTATTTTGATGGATATATCAATGCATCAACAACACTTCAGCTTTTTGTGAAGCAGTATGAGAAGGCTCTGGAGAGCCGTTTTGAAAAAGAAGTCAAAGCTGACTATGACACTATTAACACCACTCCAATTCTGAAGACTCCATCACCTATGGAGAAACAGGCAGCAGGAGTTTACACAAGGAGGTTGTTTATCAAATTTCAAGAAGAGTTGGTTGAGACATTAACATTCTTGGCAAACAAAGTAGACGAAGAAGAAATGATTACCGTGTATAGAGTAGCCAAATATGGGGAAATGCACCGAGCCTACTTTGTCAACTTTAATTCGTTTGAGATGAAAGCTACTTGTAGCTGCCAGATGTTTGAGTTTTGTGGTCTAGTTTGTAGACATATATTAACTGTTTTTAGGGTGACAAACCTTCTTACTTTACCATCTCATTATATTTTAAAAAGATGGACCAGGATTGCTAAAAGTGGTGTCATATTGGATGAACGTACTTCTAATTTGTCAAATGGTGCTCACGAATCTCTAACCATCCGATTCAACAATCTTCGTCACCAGGCTCTTAAATATGTTGACGAGGGAGTAACCTCTTCAGAAGTTTATGACGTAGCAATAAGTGCTCTTCGGGAGGCTGCGAATAAAGTGGAATCTGCAACAAAAAATGATGGAAGACAGGTTATTGTAAACGGAACTTGTGAAGAATACCTTCATCAAAGCAATGGAGTAACAATAAGACGCAGTGATCCTCCCTTTGGCTCGCAACAATCTTCATATAAGGATGAGCAGGATAGAACAATTGAGAAGTTGACACGGCAACTAGACCGAGCTCGAAGGAAATGTGAAGTTTACAGATCCAACTTGCTGTCAATTTTAAAAGACATTGAAGAGCAGAAGCTACAATTATCAGTTAAAGTCCAAAATATTAAGTTGGGAATGAAAGAGTGA 2367 0.4199 MEFEPLSLSNEVIEFDMIGLGYDATIDMEHPVEDGEDLVNIDYSPAAANSVLAAGVGPHIFGGDTNLEPCQGMDFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGSIIQRSFVCAKEGFRVEKEKHLVDGRVKRPRAETRVGCKAMLVVKIQDSGRWVVSSFVREHNHDLVPPDKVHCLRSHRHVAGPAKSLIDTLQSAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSRQRTLGGDTQILLDYLKSKQAENPSFFYDVQGDDDHCMSNILWVDPKARTNYTYFGDTVTFDTTYRSNRYRLPFAPFTGINHHGQPVLFGCALLINESEASFVWLFKTWLEAMSGRPPVSITTDHDRVICAAINHVFPGTRHRFCKWHIFKECQEKLSHVLSEHHNFEADLHKCINLTESIEEFESCWTCLTDRYDLQKHEWLQSIYNDRRQWVPVYLRDTFFAEMSITQRSDNINSYFDGYINASTTLQLFVKQYEKALESRFEKEVKADYDTINTTPILKTPSPMEKQAAGVYTRRLFIKFQEELVETLTFLANKVDEEEMITVYRVAKYGEMHRAYFVNFNSFEMKATCSCQMFEFCGLVCRHILTVFRVTNLLTLPSHYILKRWTRIAKSGVILDERTSNLSNGAHESLTIRFNNLRHQALKYVDEGVTSSEVYDVAISALREAANKVESATKNDGRQVIVNGTCEEYLHQSNGVTIRRSDPPFGSQQSSYKDEQDRTIEKLTRQLDRARRKCEVYRSNLLSILKDIEEQKLQLSVKVQNIKLGMKE 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01691 788 ProSiteProfiles Zinc finger SWIM-type profile. 576 612 IPR007527 GO:0008270
Viun2g01691 788 SMART 26again6 587 614 IPR006564 GO:0008270
Viun2g01691 788 Pfam FAR1 DNA-binding domain 84 175 IPR004330 -
Viun2g01691 788 MobiDBLite consensus disorder prediction 717 738 - -
Viun2g01691 788 MobiDBLite consensus disorder prediction 717 733 - -
Viun2g01691 788 Pfam MULE transposase domain 296 388 IPR018289 -
Viun2g01691 788 Coils Coil 733 760 - -
Viun2g01691 788 Pfam SWIM zinc finger 584 610 IPR007527 GO:0008270
Viun2g01691 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 691 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01691 Viun-Chr2 26474711 26479296 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun2g01691 MULE 3.7e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01691 - - gmx:100782414 1413.67