Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01682 ATGACCATTGACGTGCCACCGTCCAGTGCCCATAGTGTTAGAACAAACAGATCTTCCTTTGGTTCTAGCAATGGCAGTGAGGCTACTCCATTACACAACTATGCATCTGTTAGCAATGGTGATGGCTATGACAGTGATGGCTCTAATTTCGCACCATCTACACCAACAACCCTATCAAGTGCTATTCCAGCAGAACTCGCTGGAGCTGTACCCTTGATTGATAAATTCCAGGTGGAAGGATTCTTGAAACTGATGCATAAACAAATTCAGTCTGCTGGAAAACGTGGATTTTTTTCAAAAAGATCCGTGGGACCCCAAGTTCGAGAGAAATTTACATTTGAGGACATGCTTTGTTTCCAAAAAGATCCAATACCTACGTCTTTGCTTAAGCTGAACAGTGACTTGGCAAGCCGAGCAACAAAGTTATTTTTAATAATTTTGAAATATATCGGAGCTGATTCATCTGACCGTGTAACTCCATTAAACTTTGATGAACGAGTTGAGCTTGTTGGTAAATTATACAAGCAGTGTTTGAAGCGTTCAGAACTCCGAGATGAACTTTTTCTCCAGATATCAAAACAAACGAGAAACAACCCTGAGAGGGAATGCTTGATTAAAGCATGGGAGCTAATGTATTTATGTGCTTTGTCCATGCCTCCCAGTAAAGACATTGGAGCATATTTGTCAGAATATGTTCATAACGTAGCACATGGTGTGCTTGCTGATCCTCAGATTCGAGCCCTTGCTTTAAATACGTTAAATGCTTTGAAGCACTCTGTCAAGGCAGGTCCTAGACATATAATACCTGGACCTATCGAGATTGAAGCCATGTTGACTGGGAAAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACATTTGAAGAAATTACATATGACTTGTCAACAACAGTTGCTGATGCCGTTGAGGAACTTGCCGGGATCATTAAATTGTCAACATACTCGAGCTTTAGCTTGTTTGAATGTCGTAAAGTTGTTACCGGTTCCAAGTCGCCGGATTCTGGGAATGAGGAGTACATTGGATTAGATGATAATAAATATATCGGGGATCTGCTGGCGGAATTTAAGGCAGTTAAAGAACGAAGTAAGGGAGAAATTCTGCACTGTAAGCTAATATTCAAGAAAAAGTTATTTCGTGACTCAGATGAAGCTGTCACAGATCCAATGTTTTTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAACTATCCTATTGGAAAGGATGACGCTTCCCAGCTTTCTGCACTGCAAATCTTGGCTGAGATAGGATTTGTTAGAAGACCAGAATCATGCACTGACTGGAATTCATTCCTGGAGCGATTTCTACCTAGACAAATTGCAATGACTCGAGCAAAACGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGCGCATGTGACTAAAGATGATGCAAGACAACAATTTCTCCATATATTGAGAACAATTCCTTATGGATTTTCTGTTTTCTTCAATGTTCGCAAAATTGATGATCCAATTGGACTCTTGCCTGGAAGAATTATTTTGGGAATCAATAAAAGAGGGGTCCATTTTTTCCGTCCTGTTCCCAAGGAGTATATGCACTCTGCCGAGTTGAGAGATATAATGCAATTTGGAAGCAGCAATACTGCAGTATTTTTTAAAATGCGAGTTGCAGGTGTTCTTCACATATTTCAGTTTGAGACAAAGCAGGGAGAAGAAATCTGTGTAGCCCTTCAGACACACATAAATGATGTTATGCTGCGACGTTATTCCAAAGCTCGATCTACCGTGGGTGGTTCTCTGAATGAGGATACTTCTACTAACTTTAAGCCTTCTAATTTGGAATTATATGAGAAGCGTGTTCAAGATTTATCAAAACTTGTTGAAGAGTCTCAAACAAATGCTGATCAATTGCTAGAGAAATTACGTCAGAAGCATAAACAAGAAGAGGAAATGCTACAAGAATTAGATGGCTTAAAAAAGTCTTTAAAAGCTGATAAGCAGAGTCTTGCAGAAGTTACTGATGACCGTGACAAACTTAGGTCTTTATGCTTAGAAAAAGATAAGGAACTTCAGGCTAAAATTCTCGAGAAAAGAAACATGGAAGCACAGATGGCCAAGCTGAGTAATCAGGTTACTGAAAACGCCACAAAAAATGACCTGCTTCAAGCAGATAACCAAGTGTCACAAAAACTTGAAGACGACCTAAAATTATGTAAAGGTGAGCTGCTTGAAGCTGAAGAGACCATCAAAAGCTTGAGAAGTGAAAAGTTGATTTTGGAACGGAAGCTATTTGAGTTTGAGAAGAAGAGTGAAGAAGAGATTAGTTCTCTACAATGTAAACTTGAGCAAGAACGCAAGAATTTGAACTCTCATGCACATGACCTTGAACGAAAACTGGATATGCTTAGACAAGAATTGACTGTGGCCAAGTCTACACTTTCAGTCAAGGACTCTGAATTGGCTGCTTTGAAGAACAATTTAGATGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAGACAGCAGCCATTCTGAAGATGCAAGCGGCTCAACTAGGTGAAATGGAATTGCTGTATAAGGAAGAGCAGGTTCTAAGAAAGAGATATTTTAATACCATAGAAGATATGAAAGGCAAAATAAGAGTTTATTGTCGGTTAAGACCTCTTAGTGAAAAAGAGATTGCAAACAAAGAAAGAGATTCTCTTACTACTGTTGATGAGTTTACAGTTGAGCACCCATGGAAAGATGACAAAGCAAAACAACACATATACGATCGTGTATTTGATGGTTATTCCACTCAAGAAGATGTATTTGAGGATACTAGGTACCTAGTGCAATCTGCTGTAGATGGTTATAATGTTTGCATATTTGCTTATGGTCAAACTGGTTCTGGAAAGACTTTTACAATCTATGGAGCTGAAAACAATCCTGGACTCACCCCACGTGCCACTGCAGAACTTTTTAGGATTTTAAGAAGAGATAGTAACAAGTATTCTTTTTCCTTGAAGGCATATATGTTGGAGTTATATCAAGATACACTTGTAGATCTTCTGTTACCCAAGAATTCAAAGCGTTTAAAATTGGATATTAAGAAGGATTCAAAGGGAATGGTAGCAGTTGAAAACGTAACAATTGTGTCCATTTCTAATGTGGAGGAATTAAACAGCATAATACAGAGGGGATCTGAGCAGCGGCATACATCAGGGACACGAATGAATGATGAAAGCTCAAGATCTCATCTCATACTATCAATTGTCATTGAAAGTACCAACCTTCAAAGCCAATCAACTGCAAGGGGAAAGTTAAGTTTTGTGGATCTTGCTGGGTCAGAGAGAATAAAAAAGTCAGGTTCAGAAGGTAATCAACTTAAAGAAGCTCAAAGTATCAACAAATCATTATCAGCACTAGGAGATGTTATCAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTACAGAAATCATAAGTTAACGATGTTGATGAGTGACTCACTTGGGGGTAATGCCAAAACTCTCATGTTTGTGAATGTATCTCCAACAGAATCAAGCTTGGATGAGACACATAACTCTCTCATGTATGCATCACGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCAAAAGAAATAGCTCGACTGAAGAAACTGGTTGCATATTGGAAGGAGCAAGCAGGTAGAAGAGGAGAGGATGAAGAGTTGGAAGAAATTCAAGAAGAAAGACCAACTAAAGAGAAGAGTGATGGGAGGCATTCTATGTAG 3810 0.3887 MTIDVPPSSAHSVRTNRSSFGSSNGSEATPLHNYASVSNGDGYDSDGSNFAPSTPTTLSSAIPAELAGAVPLIDKFQVEGFLKLMHKQIQSAGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKLNSDLASRATKLFLIILKYIGADSSDRVTPLNFDERVELVGKLYKQCLKRSELRDELFLQISKQTRNNPERECLIKAWELMYLCALSMPPSKDIGAYLSEYVHNVAHGVLADPQIRALALNTLNALKHSVKAGPRHIIPGPIEIEAMLTGKKLTTIVFFLDETFEEITYDLSTTVADAVEELAGIIKLSTYSSFSLFECRKVVTGSKSPDSGNEEYIGLDDNKYIGDLLAEFKAVKERSKGEILHCKLIFKKKLFRDSDEAVTDPMFLQLSYVQLQHDYILGNYPIGKDDASQLSALQILAEIGFVRRPESCTDWNSFLERFLPRQIAMTRAKREWELDILSCYHSLAHVTKDDARQQFLHILRTIPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSTVGGSLNEDTSTNFKPSNLELYEKRVQDLSKLVEESQTNADQLLEKLRQKHKQEEEMLQELDGLKKSLKADKQSLAEVTDDRDKLRSLCLEKDKELQAKILEKRNMEAQMAKLSNQVTENATKNDLLQADNQVSQKLEDDLKLCKGELLEAEETIKSLRSEKLILERKLFEFEKKSEEEISSLQCKLEQERKNLNSHAHDLERKLDMLRQELTVAKSTLSVKDSELAALKNNLDELEELREMKEDIDRKNEQTAAILKMQAAQLGEMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSEKEIANKERDSLTTVDEFTVEHPWKDDKAKQHIYDRVFDGYSTQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGAENNPGLTPRATAELFRILRRDSNKYSFSLKAYMLELYQDTLVDLLLPKNSKRLKLDIKKDSKGMVAVENVTIVSISNVEELNSIIQRGSEQRHTSGTRMNDESSRSHLILSIVIESTNLQSQSTARGKLSFVDLAGSERIKKSGSEGNQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPTESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRGEDEELEEIQEERPTKEKSDGRHSM 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01682 1269 ProSiteProfiles Kinesin motor domain profile. 893 1214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01682 1269 SUPERFAMILY PH domain-like 503 591 - -
Viun2g01682 1269 Coils Coil 621 673 - -
Viun2g01682 1269 Gene3D - 1217 1265 - -
Viun2g01682 1269 Gene3D - 282 385 - -
Viun2g01682 1269 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Viun2g01682 1269 CDD FERM_B-lobe 398 495 IPR019748 -
Viun2g01682 1269 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Viun2g01682 1269 Gene3D Kinesin motor domain 880 1216 IPR036961 -
Viun2g01682 1269 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Viun2g01682 1269 MobiDBLite consensus disorder prediction 1 38 - -
Viun2g01682 1269 PANTHER MYOSIN VII, XV 8 156 - -
Viun2g01682 1269 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 501 610 - -
Viun2g01682 1269 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Viun2g01682 1269 FunFam Kinesin-like calmodulin-binding protein 837 1216 - -
Viun2g01682 1269 Gene3D - 386 497 IPR014352 -
Viun2g01682 1269 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Viun2g01682 1269 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 282 385 - -
Viun2g01682 1269 PRINTS Kinesin heavy chain signature 1115 1133 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01682 1269 PRINTS Kinesin heavy chain signature 965 986 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01682 1269 PRINTS Kinesin heavy chain signature 1164 1185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01682 1269 PRINTS Kinesin heavy chain signature 1084 1101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01682 1269 CDD KISc_C_terminal 891 1216 - -
Viun2g01682 1269 Gene3D - 501 607 IPR011993 -
Viun2g01682 1269 Gene3D MyTH4 domain 98 280 IPR038185 -
Viun2g01682 1269 ProSiteProfiles FERM domain profile. 283 597 IPR000299 GO:0005856
Viun2g01682 1269 Pfam Kinesin motor domain 899 1214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01682 1269 SMART B41_5 279 503 IPR019749 -
Viun2g01682 1269 SUPERFAMILY Prismane protein-like 836 897 IPR011254 GO:0003824|GO:0016491
Viun2g01682 1269 MobiDBLite consensus disorder prediction 1240 1269 - -
Viun2g01682 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 893 1242 IPR027417 -
Viun2g01682 1269 Coils Coil 698 718 - -
Viun2g01682 1269 SMART kinesin_4 891 1222 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01682 1269 FunFam Kinesin-like calmodulin binding protein 386 497 - -
Viun2g01682 1269 ProSitePatterns Kinesin motor domain signature. 1114 1125 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun2g01682 1269 Pfam FERM central domain 388 503 IPR019748 -
Viun2g01682 1269 CDD FERM_C_KCBP 501 606 - -
Viun2g01682 1269 Coils Coil 736 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01682 Viun-Chr2 26403745 26412134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01682 28 1264 Calmodulin-binding Proteins AT5G65930 71.737 0.0 1807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01682 - - vun:114173778 2406.33