Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01681 ATGACCATTGACGTGCCACCGTCCAGTGCCCATAGTGTTAGAACAAACAGATCTTCCTTTGGTTCTAGCAATGGCAGTGAGGCTACTCCATTACACAACTATGCATCTGTTAGCAATGGTGATGGCTATGACAGTGATGGCTCTAATTTCGCACCATCTACACCAACAACCCTATCAAGTGCTATTCCAGCAGAACTCGCTGGAGCTGTACCCTTGATTGATAAATTCCAGGTGGAAGGATTCTTGAAACTGATGCATAAACAAATTCAGTCTGCTGGAAAACGTGGATTTTTTTCAAAAAGATCCGTGGGACCCCAAGTTCGAGAGAAATTTACATTTGAGGACATGCTTTGTTTCCAAAAAGATCCAATACCTACGTCTTTGCTTAAGCTGAACAGTGACTTGGCAAGCCGAGCAACAAAGTTATTTTTAATAATTTTGAAATATATCGGAGCTGATTCATCTGACCGTGTAACTCCATTAAACTTTGATGAACGAGTTGAGCTTGTTGGTAAATTATACAAGCAGTGTTTGAAGCGTTCAGAACTCCGAGATGAACTTTTTCTCCAGATATCAAAACAAACGAGAAACAACCCTGAGAGGGAATGCTTGATTAAAGCATGGGAGCTAATGTATTTATGTGCTTTGTCCATGCCTCCCAGTAAAGACATTGGAGCATATTTGTCAGAATATGTTCATAACGTAGCACATGGTGTGCTTGCTGATCCTCAGATTCGAGCCCTTGCTTTAAATACGTTAAATGCTTTGAAGCACTCTGTCAAGGCAGGTCCTAGACATATAATACCTGGACCTATCGAGATTGAAGCCATGTTGACTGGGAAAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACATTTGAAGAAATTACATATGACTTGTCAACAACAGTTGCTGATGCCGTTGAGGAACTTGCCGGGATCATTAAATTGTCAACATACTCGAGCTTTAGCTTGTTTGAATGTCGTAAAGTTGTTACCGGTTCCAAGTCGCCGGATTCTGGGAATGAGGAGTACATTGGATTAGATGATAATAAATATATCGGGGATCTGCTGGCGGAATTTAAGGCAGTTAAAGAACGAAGTAAGGGAGAAATTCTGCACTGTAAGCTAATATTCAAGAAAAAGTTATTTCGTGACTCAGATGAAGCTGTCACAGATCCAATGTTTTTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAACTATCCTATTGGAAAGGATGACGCTTCCCAGCTTTCTGCACTGCAAATCTTGGCTGAGATAGGATTTGTTAGAAGACCAGAATCATGCACTGACTGGAATTCATTCCTGGAGCGATTTCTACCTAGACAAATTGCAATGACTCGAGCAAAACGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGCGCATGTGACTAAAGATGATGCAAGACAACAATTTCTCCATATATTGAGAACAATTCCTTATGGATTTTCTGTTTTCTTCAATGTTCGCAAAATTGATGATCCAATTGGACTCTTGCCTGGAAGAATTATTTTGGGAATCAATAAAAGAGGGGTCCATTTTTTCCGTCCTGTTCCCAAGGAGTATATGCACTCTGCCGAGTTGAGAGATATAATGCAATTTGGAAGCAGCAATACTGCAGTATTTTTTAAAATGCGAGTTGCAGGTGTTCTTCACATATTTCAGTTTGAGACAAAGCAGGTATTGGCATGTTCTTTGTTTTGTGGTGGACTTGGTTCATTCTTTTCCTCACTAAATCAATGTCATTATATCATTCTTTTGAAGGGAGAAGAAATCTGTGTAGCCCTTCAGACACACATAAATGATGTTATGCTGCGACGTTATTCCAAAGCTCGATCTACCGTGGGTGGTTCTCTGAATGAGGATACTTCTACTAACTTTAAGCCTTCTAATTTGGAATTATATGAGAAGCGTGTTCAAGATTTATCAAAACTTGTTGAAGAGTCTCAAACAAATGCTGATCAATTGCTAGAGAAATTACGTCAGAAGCATAAACAAGAAGAGGAAATGCTACAAGAATTAGATGGCTTAAAAAAGTCTTTAAAAGCTGATAAGCAGAGTCTTGCAGAAGTTACTGATGACCGTGACAAACTTAGGTCTTTATGCTTAGAAAAAGATAAGGAACTTCAGGCTAAAATTCTCGAGAAAAGAAACATGGAAGCACAGATGGCCAAGCTGAGTAATCAGGTTACTGAAAACGCCACAAAAAATGACCTGCTTCAAGCAGATAACCAAGTGTCACAAAAACTTGAAGACGACCTAAAATTATGTAAAGGTGAGCTGCTTGAAGCTGAAGAGACCATCAAAAGCTTGAGAAGTGAAAAGTTGATTTTGGAACGGAAGCTATTTGAGTTTGAGAAGAAGAGTGAAGAAGAGATTAGTTCTCTACAATGTAAACTTGAGCAAGAACGCAAGAATTTGAACTCTCATGCACATGACCTTGAACGAAAACTGGATATGCTTAGACAAGAATTGACTGTGGCCAAGTCTACACTTTCAGTCAAGGACTCTGAATTGGCTGCTTTGAAGAACAATTTAGATGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAGACAGCAGCCATTCTGAAGATGCAAGCGGCTCAACTAGGTGAAATGGAATTGCTGTATAAGGAAGAGCAGGTTCTAAGAAAGAGATATTTTAATACCATAGAAGATATGAAAGGCAAAATAAGAGTTTATTGTCGGTTAAGACCTCTTAGTGAAAAAGAGATTGCAAACAAAGAAAGAGATTCTCTTACTACTGTTGATGAGTTTACAGTTGAGCACCCATGGAAAGATGACAAAGCAAAACAACACATATACGATCGTGTATTTGATGGTTATTCCACTCAAGAAGATGTATTTGAGGATACTAGGTACCTAGTGCAATCTGCTGTAGATGGTTATAATGTTTGCATATTTGCTTATGGTCAAACTGGTTCTGGAAAGACTTTTACAATCTATGGAGCTGAAAACAATCCTGGACTCACCCCACGTGCCACTGCAGAACTTTTTAGGATTTTAAGAAGAGATAGTAACAAGTATTCTTTTTCCTTGAAGGCATATATGTTGGAGTTATATCAAGATACACTTGTAGATCTTCTGTTACCCAAGAATTCAAAGCGTTTAAAATTGGATATTAAGAAGGATTCAAAGGGAATGGTAGCAGTTGAAAACGTAACAATTGTGTCCATTTCTAATGTGGAGGAATTAAACAGCATAATACAGAGGGGATCTGAGCAGCGGCATACATCAGGGACACGAATGAATGATGAAAGCTCAAGATCTCATCTCATACTATCAATTGTCATTGAAAGTACCAACCTTCAAAGCCAATCAACTGCAAGGGGAAAGTTAAGTTTTGTGGATCTTGCTGGGTCAGAGAGAATAAAAAAGTCAGGTTCAGAAGGTAATCAACTTAAAGAAGCTCAAAGTATCAACAAATCATTATCAGCACTAGGAGATGTTATCAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTACAGAAATCATAAGTTAACGATGTTGATGAGTGACTCACTTGGGGGTAATGCCAAAACTCTCATGTTTGTGAATGTATCTCCAACAGAATCAAGCTTGGATGAGACACATAACTCTCTCATGTATGCATCACGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCAAAAGAAATAGCTCGACTGAAGAAACTGGTTGCATATTGGAAGGAGCAAGCAGGTAGAAGAGGAGAGGATGAAGAGTTGGAAGAAATTCAAGAAGAAAGACCAACTAAAGAGAAGAGTGATGGGAGGCATTCTATGTAG 3894 0.3875 MTIDVPPSSAHSVRTNRSSFGSSNGSEATPLHNYASVSNGDGYDSDGSNFAPSTPTTLSSAIPAELAGAVPLIDKFQVEGFLKLMHKQIQSAGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKLNSDLASRATKLFLIILKYIGADSSDRVTPLNFDERVELVGKLYKQCLKRSELRDELFLQISKQTRNNPERECLIKAWELMYLCALSMPPSKDIGAYLSEYVHNVAHGVLADPQIRALALNTLNALKHSVKAGPRHIIPGPIEIEAMLTGKKLTTIVFFLDETFEEITYDLSTTVADAVEELAGIIKLSTYSSFSLFECRKVVTGSKSPDSGNEEYIGLDDNKYIGDLLAEFKAVKERSKGEILHCKLIFKKKLFRDSDEAVTDPMFLQLSYVQLQHDYILGNYPIGKDDASQLSALQILAEIGFVRRPESCTDWNSFLERFLPRQIAMTRAKREWELDILSCYHSLAHVTKDDARQQFLHILRTIPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQVLACSLFCGGLGSFFSSLNQCHYIILLKGEEICVALQTHINDVMLRRYSKARSTVGGSLNEDTSTNFKPSNLELYEKRVQDLSKLVEESQTNADQLLEKLRQKHKQEEEMLQELDGLKKSLKADKQSLAEVTDDRDKLRSLCLEKDKELQAKILEKRNMEAQMAKLSNQVTENATKNDLLQADNQVSQKLEDDLKLCKGELLEAEETIKSLRSEKLILERKLFEFEKKSEEEISSLQCKLEQERKNLNSHAHDLERKLDMLRQELTVAKSTLSVKDSELAALKNNLDELEELREMKEDIDRKNEQTAAILKMQAAQLGEMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSEKEIANKERDSLTTVDEFTVEHPWKDDKAKQHIYDRVFDGYSTQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGAENNPGLTPRATAELFRILRRDSNKYSFSLKAYMLELYQDTLVDLLLPKNSKRLKLDIKKDSKGMVAVENVTIVSISNVEELNSIIQRGSEQRHTSGTRMNDESSRSHLILSIVIESTNLQSQSTARGKLSFVDLAGSERIKKSGSEGNQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPTESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRGEDEELEEIQEERPTKEKSDGRHSM 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01681 1297 PRINTS Kinesin heavy chain signature 1143 1161 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01681 1297 PRINTS Kinesin heavy chain signature 993 1014 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01681 1297 PRINTS Kinesin heavy chain signature 1112 1129 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01681 1297 PRINTS Kinesin heavy chain signature 1192 1213 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01681 1297 CDD KISc_C_terminal 919 1244 - -
Viun2g01681 1297 Gene3D - 282 385 - -
Viun2g01681 1297 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Viun2g01681 1297 CDD FERM_B-lobe 398 495 IPR019748 -
Viun2g01681 1297 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Viun2g01681 1297 MobiDBLite consensus disorder prediction 1268 1297 - -
Viun2g01681 1297 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 282 385 - -
Viun2g01681 1297 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Viun2g01681 1297 PANTHER MYOSIN VII, XV 8 156 - -
Viun2g01681 1297 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Viun2g01681 1297 Gene3D - 386 497 IPR014352 -
Viun2g01681 1297 MobiDBLite consensus disorder prediction 1 38 - -
Viun2g01681 1297 Coils Coil 726 746 - -
Viun2g01681 1297 Coils Coil 764 886 - -
Viun2g01681 1297 Pfam FERM central domain 388 503 IPR019748 -
Viun2g01681 1297 FunFam Kinesin-like calmodulin binding protein 386 497 - -
Viun2g01681 1297 ProSiteProfiles FERM domain profile. 283 596 IPR000299 GO:0005856
Viun2g01681 1297 Gene3D MyTH4 domain 98 280 IPR038185 -
Viun2g01681 1297 ProSitePatterns Kinesin motor domain signature. 1142 1153 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun2g01681 1297 Coils Coil 649 701 - -
Viun2g01681 1297 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Viun2g01681 1297 SMART B41_5 279 503 IPR019749 -
Viun2g01681 1297 ProSiteProfiles Kinesin motor domain profile. 921 1242 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01681 1297 Gene3D - 1245 1293 - -
Viun2g01681 1297 Gene3D Kinesin motor domain 908 1244 IPR036961 -
Viun2g01681 1297 Pfam Kinesin motor domain 927 1242 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01681 1297 Gene3D - 501 584 IPR011993 -
Viun2g01681 1297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 921 1270 IPR027417 -
Viun2g01681 1297 FunFam Kinesin-like calmodulin-binding protein 865 1244 - -
Viun2g01681 1297 SUPERFAMILY PH domain-like 503 578 - -
Viun2g01681 1297 SUPERFAMILY Prismane protein-like 864 925 IPR011254 GO:0003824|GO:0016491
Viun2g01681 1297 SMART kinesin_4 919 1250 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01681 Viun-Chr2 26403743 26412134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01681 28 1292 Calmodulin-binding Proteins AT5G65930 70.164 0.0 1790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01681 - - vun:114173778 2479.13