Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01674 ATGGCGAGCGTTGGAGTTGGAGGGGGTTTGGGGGGTGATATATGGAAGTCCCATGTGTCCATGGCGATGGTGCAGCTTTTCAATGGTGGCTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGTATCAACCAGTTAGTGTTCTGCGTATTCCGCGATCTCATTGCCCTTTCCATCCTCGCACCCCTTGCTTATATCCGTGAAAAACGGATTCGACCACCCACTACTAAGAACCTACTGGTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAACTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCCATACAACCGTCTATTCCAGTCTTTACCTTTATATTGGCTGTGATGATGGGTACAGAAAGAGTGAATTTAGTCACATATGATGGTCTGGCTAAAGTTGGAGGAACCATCATCTGTGTTTCTGGTGCTGTAGTGATGGTTTTGTATCGAGGTCCAGCTTTGATAGGATATGCTGATATCAATCTTGCTACACAAAATGAAATAAGTGCCAGAGGTCAGCCAGAGCCATCTGGATGGCTAATTGGTAGTTTACAAGACTTCGGGTTAGACCATTTTCATCTTGGGGTTCTGTGTTTGATAGGGAATTGCATTTGTATGGCTGCGTTTCTAGCCATTCAGGCACCAGTATTAAAAAAATATCAGGCAAACATATCGGTCACAGCATTTTCATACTTCTTCGGAGCTTCACTGATGGTTATAGTGTCATTATTCATGAATTACGAGGCAAATGACTGGACTTTGACATCATCAGAAATCCTTGCTGTTATGTATGCTGGAACTGTTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAAATCTTGGGGCCAGCCATGGTTTCCCTTTACAATCCTCTTCAACCTGCGTTTTCAGCCATCCTCTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGTTCTTTTATCATTACCGGTCTATATTTAGTTACCTGGGCATCATTTAAAGAAAAACGAGCATCTCTTGGAGTTGGAGTAGCTAGCCCTTCTTCCTCTTGGGTCTCTGAACCACTTGTTCACGACAGAAGTTCACTCCAGAAAGGCCACGCTTTTTCTGGGTCCTCCTCCGTTTCCCCCAAAACCTTTTCAGATTAA 1188 0.4335 MASVGVGGGLGGDIWKSHVSMAMVQLFNGGYHVITKVALNVGINQLVFCVFRDLIALSILAPLAYIREKRIRPPTTKNLLVSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFILAVMMGTERVNLVTYDGLAKVGGTIICVSGAVVMVLYRGPALIGYADINLATQNEISARGQPEPSGWLIGSLQDFGLDHFHLGVLCLIGNCICMAAFLAIQAPVLKKYQANISVTAFSYFFGASLMVIVSLFMNYEANDWTLTSSEILAVMYAGTVASALNYGLITWCNKILGPAMVSLYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIITGLYLVTWASFKEKRASLGVGVASPSSSWVSEPLVHDRSSLQKGHAFSGSSSVSPKTFSD 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01674 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 347 - -
Viun2g01674 395 MobiDBLite consensus disorder prediction 378 395 - -
Viun2g01674 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 159 - -
Viun2g01674 395 MobiDBLite consensus disorder prediction 376 395 - -
Viun2g01674 395 Pfam EamA-like transporter family 21 156 IPR000620 GO:0016020
Viun2g01674 395 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020
Viun2g01674 395 PANTHER WAT1-RELATED PROTEIN 19 349 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01674 Viun-Chr2 26358024 26364462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01674 100 375 Nodulin-like Gene Family AT5G45370 62.816 1.29e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01674 - - gmx:100787738 643.269