Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01640 ATGATGTCACGGAGGAGTTTCAGCGTGGTGCATGGTGGAGCCGAACTGGTGGTGCCAGCAGGAGCAACTCCAGGAGAAGTGAAGAAGCTCTCAGACATAGATGATCAAGAGGGGCTACGTTTTCAGCTTCCTGTGATCATGTTCTACAGAAATGGTTCTGCTGTGGAAGGAAAAGATGCTTGTAAGGTTTATAAGAAAGGTTTAGGTGAAGCACTGGTGCACTATTACCCTCTTGCTGGTAGACTGAGAGAAGGGCCTAACAGAAAGCTTATGGTGGATTGCAATGGTGAGGGGATATTGTTGGTGGAAGCTGAGGCTCATGTTTCACTCAAGGAGTTGGGGAATGAGATTCTTCCACCGTGCCCTTATATGAAGGACTTTCTTCTTGACGTTCCTGGATCACGAGGCATTCTTGGAAGCCCTCTCTTGCTGGTTCAGGTAACCCGTTTAACATGCGGAGGATTTGTTTTCGCTGCTCGCATGAACCACACGATCTGTGACTCATTGGGGTTGGTGCAATTTCTGACCATGGTGGGTGAGATTGCAAGAGGTGCTTCCATAACCCACTTCCCTGTGTGGCAAAGAGAGTTATTCAGTGCAAGGAACCCACCAAGAATCACTTGTGCACACCATGAATATGAAACCCAACACTGCCACAAAGAAACATGGGACACCCACCAAATGGACCATCGATCATTTTTCTTTGGTCCCAGAGAGATTGCAACCCTTCGGAATCACCTACCCAACCACCTTAAAAATTCTTCAACTTTTGAGGTGCTCTCTGCCTGTTTGTGGAAATGTCGAACTATAGCACTTGGGCTGAAACCCAACGAGAGTGTAGGCCTGTCACCCTTTATCACTGCTCGTGGCAAACTGGGCCTGCAAGTGCCAAATGGGTACTATGGCAATGCCTTTGCCTTCCCAATGGCTCTTTCAAGGGCTGGGCCTTTGTGCCAAAACCCATTGGGGTATGCATTGGAGTTGGTAAAAATGGCAAAGGCTCAAATGGGTGCAGAATATGTGAGTTCTGTGGCTGATCTTATGGTTCTAAAGGGTCGACCCATGTATAGGACTGAAGGGAACTACCTTATTGGGGACACTACTCAAGTGGGGTTCTATGAAGTGGATTTTGGGTGGGGGAGTCCTATATATGGAGGACCAGCTGGGGCTATACCTTTTGTTAGCTTCTATGGACGTTTTAGGAACAGTGAAGGAGAGGATGTAATTGTGGTGCCAATTTTGTTGCCACACCATGTCATGAGGAGCTTTCTCTCTGAACTGGTAAAGATCACAAACAAGGACCCTATGGACCTTTCTGATGAGAATATGCCAAATAGGTCCATGTTGTAA 1350 0.4726 MMSRRSFSVVHGGAELVVPAGATPGEVKKLSDIDDQEGLRFQLPVIMFYRNGSAVEGKDACKVYKKGLGEALVHYYPLAGRLREGPNRKLMVDCNGEGILLVEAEAHVSLKELGNEILPPCPYMKDFLLDVPGSRGILGSPLLLVQVTRLTCGGFVFAARMNHTICDSLGLVQFLTMVGEIARGASITHFPVWQRELFSARNPPRITCAHHEYETQHCHKETWDTHQMDHRSFFFGPREIATLRNHLPNHLKNSSTFEVLSACLWKCRTIALGLKPNESVGLSPFITARGKLGLQVPNGYYGNAFAFPMALSRAGPLCQNPLGYALELVKMAKAQMGAEYVSSVADLMVLKGRPMYRTEGNYLIGDTTQVGFYEVDFGWGSPIYGGPAGAIPFVSFYGRFRNSEGEDVIVVPILLPHHVMRSFLSELVKITNKDPMDLSDENMPNRSML 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01640 449 Pfam Transferase family 13 426 - -
Viun2g01640 449 Gene3D - 10 210 IPR023213 -
Viun2g01640 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 423 - -
Viun2g01640 449 Gene3D - 211 425 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01640 Viun-Chr2 26077629 26081444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01640 14 430 Monolignol Biosynthesis Gene Families AT5G48930 28.472 1.35e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01640 - K19861 gmx:100817429 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01640 2 26077629 26081444 Viun2g01640 2 26077629 26081444 ECH