Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01627 ATGGAGGGTGGGAGAATAAGACAGTGGTTGAACCTTCTGGTTTGTGCACTGCTGTTGCTGATAGCAGAGGCTTCTTATGTGCCAATCACCTATCTTCAGAGCGCTGTAGCAAAAGGAGCAGTTTGTTTGGATGGGAGTCCACCAGCTTACCATTTTGACAAGGGATCTGGAACAGGGATTAACAGTTGGTTGGTTGCTTTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGTCTCTCTCGCAAGACCAATCGTTTAGGTTCATCTAAGCAAATGGCAAAGCAAATTGCCTTTTCGGGAATTATGAGTAACAGGCAAATGTTTAATCCAGATTTCTACAACTGGAACAGAGTCAAGGTTAGGTATTGCGATGGTTCATCTTTTACTGGTGATGTAGAAGAAGTCAATCCAGTTACTAAGTTGCACTTTAGAGGAGCAAGGATTTTTGCTGCTGTCATGGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAATGCTATTATTTCTGGATGTTCAGCTGGAGGATTAACTTCAGTACTGCATTGTGATCGCTTTCGAGCTCTATTACCTATTGGAGCCAGAGTGAAATGCCTCTCAGATGCTGGTTATTTTATCAATGCAAGGGATGTCACTGGGGCATACCACATTCAACAGTACTTCGGTCAAGTTGTTGCTACGCATGGCTCTGCTAGGAATTTACCTCTGTCATGCACTTCAAGACTTAGTCCAAAGCTATGCTTTTTCCCACAATACTTGGCATCACATATCACTACGCCAATCTTCTTTGTAAACGCCGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCTGGTGTTGCTGATCCTGATGGGCATTGGCATAGCTGTAAACTTGATATAAACAACTGCTCACCTGATCAACTAGATCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCATTGACAGTGCTAGGCAACTCTTCATACAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACTGAAATGCAGGAAACATGGTTGAGAAGTGATTCTCCAGAGCTGGAAAAGACAACAATTGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGGACTTTCCATCAGATAGATTGCCCTTACCCCTGCAACCCCACATGTCACAACCGCGTTTTCGAACCACAAGACGGCCACCAAGGAAAAAATGTGACCTCGAAAGGAACGTCAGATGCATCAGCCAGAAAGCTCAATTTTCCGAAACTAACAACAAACAAGGCACGATGGATTGAGCTGGTGTGCATTAATGGAGGGATCAATGGGCTTCTACTAACGTTGGGTCTTATGATCATCATATAA 1353 0.4339 MEGGRIRQWLNLLVCALLLLIAEASYVPITYLQSAVAKGAVCLDGSPPAYHFDKGSGTGINSWLVAFEGGGWCNNVTTCLSRKTNRLGSSKQMAKQIAFSGIMSNRQMFNPDFYNWNRVKVRYCDGSSFTGDVEEVNPVTKLHFRGARIFAAVMEDLLAKGMKNARNAIISGCSAGGLTSVLHCDRFRALLPIGARVKCLSDAGYFINARDVTGAYHIQQYFGQVVATHGSARNLPLSCTSRLSPKLCFFPQYLASHITTPIFFVNAAYDSWQIKNILAPGVADPDGHWHSCKLDINNCSPDQLDLMQGFRTEFLRALTVLGNSSYKGMFIDSCYAHCQTEMQETWLRSDSPELEKTTIAKAVADWFYERRTFHQIDCPYPCNPTCHNRVFEPQDGHQGKNVTSKGTSDASARKLNFPKLTTNKARWIELVCINGGINGLLLTLGLMIII 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01627 450 PANTHER NOTUM-RELATED 14 388 IPR004963 GO:0016787
Viun2g01627 450 Pfam Pectinacetylesterase 22 372 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01627 Viun-Chr2 26031528 26037142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01627 5 396 Carbohydrate Esterase AT4G19420 62.061 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01627 K19882 - gmx:100818146 808.52