Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g01614 | ATGGGCATTTGTCTTTTGAAATGGCAATGGCCGTGGCTTCTTTTGATTGTGCTGCTACATGTTGTAATCATTAAGAGCAATGCTATCACTCCCGATGGTGAGGTGCTTCTCAGCTTTAGGACAGCAGTTGTTAATTCTGATGGTATCCTATTACAGTGGAGGCCAGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCGAAAACCAAAAGAGTAACACATCTGAGTCTATCTCACCATAAGTTAAGTGGGTCTATATCACCTGATCTTGGGAAGCTCGAGAGTCTGAGGGTTCTTGCTCTGCATAACAACAATTTCTATGGGACAATTCCATCAGAATTGGGAAATTGCACTGCATTGGAGGGAATATTTTTACAGGGTAATTACCTTAGTGGAATCATTCCAAGTGAAATAGGAAACCTTTCGCTGCTCATAAATTTGGACATATCGAGCAATTCCCTCAGTGGGAATATTCCTGCATCACTTGGGAAGTTGTACAATCTCAAAAATTTCAATGTATCAACCAATTTTCTGGTCGGACCTATACCTTCTGATGGTGTCCTTGGAAACTTTACTGGAAGCTCCTTTGTTGGAAATCGTGGTCTGTGCGGAGTGAAAATCAATTCTACATGTAAAGATGACGGTTCACCGGGGACCAATACTCAATCTGCTTCCTCAGACCAAAATCAAATGGGAAAGAAGAAATATTCTGGCCGGCTGCTCATCAGTGCATCAGCAACTGTGGGAGCTCTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTCCTTTACAAGAAGTTTGGTAAAAATGACAGAATAAGCCTGGCAATGGATGTTGGCGCAGGTGCATCAATTGTGATGTTTCATGGAGACCTGCCATATTCTTCAAAAGACATCATTAAGAAACTAGAGACTTTGAATGAAGAACACATAATAGGGATTGGGGGATTTGGAACTGTTTACAAGCTTGCAATGGACGATGGGAATGTCTTTGCTTTGAAAAGGATTGTAAAGTTGAATGAGGGGTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACATCGTTATCTAGTGAACTTACGAGGATATTGCAATTCCCCAACATCGAAGTTGTTAATATATGATTACCTACCAGGTGGTAGTCTTGATGAAGCTCTTCATGAAAGGGCTGAGCAACTAGACTGGGATTCACGCTTAAATATAATCATGGGAGCTGCAAAAGGGCTTGCTTACTTGCACCATGATTGCTCCCCTAGGATTATACACCGAGACATAAAATCTAGTAACATTTTGCTTGATGGAAACTTGGAAGCTCGAGTATCTGATTTTGGACTTGCCAAACTGCTGGAAGATGAAGAATCGCACATCACCACTATTGTTGCTGGAACATTTGGTTATCTTGCTCCAGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGTCTGATGTGTATAGTTTTGGTGTGTTGACACTTGAAGTGCTGAGTGGAAAGCGGCCAACAGATGCAGCATTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTAATTACAGAAAATAGACCGAGGGAAATTGTTGACCCACTATGTGATGGGGTGCAAATGGAGAGCCTTGATGCCTTGCTATCTGTGGCTATTCAGTGTGTCTCCTCAAGTCCAGAAGATCGACCCACTATGCATCGAGTAGTGCAATTGTTTGAATCAGAGGTCGTAACTCCCTGCCCCAGTGACTTCTATGATTCCAGCTCCGATTAG | 1788 | 0.4211 | MGICLLKWQWPWLLLIVLLHVVIIKSNAITPDGEVLLSFRTAVVNSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLSLSHHKLSGSISPDLGKLESLRVLALHNNNFYGTIPSELGNCTALEGIFLQGNYLSGIIPSEIGNLSLLINLDISSNSLSGNIPASLGKLYNLKNFNVSTNFLVGPIPSDGVLGNFTGSSFVGNRGLCGVKINSTCKDDGSPGTNTQSASSDQNQMGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAMDVGAGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERAEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKSDVYSFGVLTLEVLSGKRPTDAAFIEKGLNIVGWLNFLITENRPREIVDPLCDGVQMESLDALLSVAIQCVSSSPEDRPTMHRVVQLFESEVVTPCPSDFYDSSSD | 595 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g01614 | 595 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 429 | 441 | IPR008271 | GO:0004672|GO:0006468 | |
Viun2g01614 | 595 | FunFam | LRR receptor-like serine/threonine-protein kinase FEI 1 | 284 | 385 | - | - | |
Viun2g01614 | 595 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 29 | 191 | - | - | |
Viun2g01614 | 595 | Pfam | Leucine rich repeat N-terminal domain | 31 | 69 | IPR013210 | - | |
Viun2g01614 | 595 | SUPERFAMILY | L domain-like | 30 | 196 | - | - | |
Viun2g01614 | 595 | ProSitePatterns | Protein kinases ATP-binding region signature. | 316 | 342 | IPR017441 | GO:0005524 | |
Viun2g01614 | 595 | ProSiteProfiles | Protein kinase domain profile. | 310 | 582 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g01614 | 595 | Gene3D | Ribonuclease Inhibitor | 30 | 215 | IPR032675 | - | |
Viun2g01614 | 595 | SMART | serkin_6 | 310 | 582 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g01614 | 595 | SUPERFAMILY | Protein kinase-like (PK-like) | 295 | 577 | IPR011009 | - | |
Viun2g01614 | 595 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 386 | 588 | - | - | |
Viun2g01614 | 595 | Pfam | Protein kinase domain | 312 | 575 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g01614 | 595 | Gene3D | Transferase(Phosphotransferase) domain 1 | 386 | 583 | - | - | |
Viun2g01614 | 595 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 73 | 578 | - | - | |
Viun2g01614 | 595 | Gene3D | Phosphorylase Kinase; domain 1 | 283 | 385 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g01614 | Viun-Chr2 | 25969615 | 25978428 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g01614 | 1 | 586 | Receptor kinase-like Gene Family | AT2G35620 | 75.939 | 0.0 | 888 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIIIa | Viun2g01614 | Pkinase | 1.4e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g01614 | - | - | gmx:100819230 | 1086.63 |