Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01611 ATGTTCGGTGGCGGAGGGGAGGACGCGTTGGCGGCGCGGCTTGGCATGGTGACGCCGCCGCCGCTGATGAACCCGGCGACGTCGTTGGTGATGTCCGGGGAGGTATCGGCGGCGGTGAGGGAGGAGAGGGGACCGGCGCAGCCGCAGTGGAGCCAGCAGGAGACGCGGGAGTTCATAGCGATACGCGCGGAGCTGGAGCTGGACTTCACTGCGTCGAAGCGGAACAAAACGCTTTGGGAAGTGGTGAGTTCGAAGATGAGGGAGAGAGGGTTCAGGAGGAGCCCTGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGACCCAGAGCATAGCAGGCAATGTCCATTTTTTGAAGAATTGCATGCAGTATTTACCCAAAGGGCACATAATATGCAACGATTACTTCTTGAATCTGAAACTCGCTCAGCTCAAACCAAGAAAGGAGTGAAAAGACCAAGTGGAGATCGATCTTCAGAGGAACTCTCAGAAGATGACGACGAGGTTGAATATGATAGCGAAGAGGAAAAACCTTCTAGAAGCAATACCCGCAAAAGGAAAGTTGACAAAGTTGGAACGGATAAGTCTTCTTCAAGAGCAAACAATCCATCGCATGCTGTCAGTAGTACTAGTAGTATTCAGGAAATGCTAAAGGAATTTTTCCAGCACCAGTTAAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGACGTGCTCATGAAAGACAGTTGTTTGAACAGGAGTGGAGGCAGTCGATGGAGAAGCTTGAGCGGGAGAGGTTAATTATTGAACAGGCATGGAGGGAGAGAGAAGAACAGAGGAGAATGAGAGAAGAGAGTAGGGCGGAAAAAAGGGATGCTTTATTGACGACCCTTTTGAACAAACTCATTAATGAATCTAACTAA 930 0.4968 MFGGGGEDALAARLGMVTPPPLMNPATSLVMSGEVSAAVREERGPAQPQWSQQETREFIAIRAELELDFTASKRNKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHSRQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVKRPSGDRSSEELSEDDDEVEYDSEEEKPSRSNTRKRKVDKVGTDKSSSRANNPSHAVSSTSSIQEMLKEFFQHQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLIIEQAWREREEQRRMREESRAEKRDALLTTLLNKLINESN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01611 309 Coils Coil 254 274 - -
Viun2g01611 309 MobiDBLite consensus disorder prediction 182 202 - -
Viun2g01611 309 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Viun2g01611 309 CDD GT1 48 113 - -
Viun2g01611 309 Gene3D - 50 111 - -
Viun2g01611 309 MobiDBLite consensus disorder prediction 152 167 - -
Viun2g01611 309 FunFam Zinc finger and SCAN domain-containing 20 50 111 - -
Viun2g01611 309 SMART sant 46 108 IPR001005 -
Viun2g01611 309 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
Viun2g01611 309 MobiDBLite consensus disorder prediction 145 219 - -
Viun2g01611 309 MobiDBLite consensus disorder prediction 203 219 - -
Viun2g01611 309 PANTHER FI21293P1 41 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01611 Viun-Chr2 25951896 25954261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01611 44 304 Trihelix Transcription Factor Family AT2G38250 46.038 4.88e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun2g01611 Myb_DNA-bind_4 2.7e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01611 - - gmx:100812635 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01611 2 25951896 25954261 Viun2g01611 2 25951896 25954261 ECH