Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01609 ATGAAGTATTTTTCTCTTATGTTACTTGCATTTTGGTCTAAATATGTTCACCTCCTTATTCTCTTTACATTAAACTCACCATGGTTTATTCCAAAACCTGTTGCCTCTGCATCAGAAAATGAGACTGATCACATGGCACTGCTTGAATTTAGAAAATCCATATTCTCTGATCCACATGGAATCTTTCTCTCTTGGAATACTTCTACTCACTTTTGTAACTGGCATGGAATCACATGTAATCCAATGCAGCAAAGAGTTTCAGAATTGAACTTGCAGGGATACAAGTTGAAGGGATTCATATCACCTTACATTGGCAATCTATCTTATATGAGAAACATCAACCTTGGAGACAACAATTTCTATGGCAAAATCCCACAAGAATTTGGGAGATTGTCACAACTGCATAACCTTTCTGTAGCAAATAATTCATTGGGTGGAGAAATTCCTACAAACTTGACAGGTTGCACTAATCTCAAGCTTTTACATTTAGGTGGGAACAATTTTAGTGACAAAATACCTATAGAAATTGGCTCACTTAGAAAGCTTGAACAATTGTTCCTTTTAAATAACCAGTTCACTGGAGAAATCCCATCATTCATGGGAAATCTTTCATCTCTAACACTCCTTTCTGTTGGTAAAAACAACTTAGAGGGATCTATTCCACAAGAAATATGTCATCTCAAAAACTTGACAGGGATAGCATTTCATGTCAACAAACTAACAGGCACATTTCCTACTTGTCTTTATAACATGTCATCTCTTACTATAGTCTCTGCTACAAACAATCAACTTGAGGGCTCTCTTCCCACCAACATGTTCCACACTCTCCCCAACCTTCACAAACTTTTAATTTCTGGCAACCAAATCACAGGTTCAATCCCACCTTCCATCACAAATGCATCTTTCCTTTCATATCTTGATGCTGATCATAACTATTTAACAGGACTAGTTCCTAGTCTGAGCAGGTTACATGGTCTTCAGTTTCTATCTTTATCTGAGAACAACCTAGGTGACAATTCAACTGATGATTTAGTGTTTTTAACATCATTGACAAACTGTAGTCAGATGCAGGTGATAAATATAGGCTTCAATAATTTTGGAGGTCATTTGCCAAATTCTTTGGGGAATTTATCTATGCAAGTCAATCGACTATATGTTGGAGGCAATCATATATCAGGAGAAATCCCTTCTTCAATAGGAAACCTAATTGGGTTAGTTCTCTTGTCCATGACTGATAACCTCATAGATGGAATTATTCCTGCAACTTTTGGTAAGCTTCAGAATATGCAAAAGTTGCGTTTAGGTAGAAACAAGTTATCAGGGGGGATAGGAGCCTTCATTGGCAACCTAAGTCAATTGTTTCACTTGGATGTGGGAGAAAATATGTTAGAAGGAAAGGTTCCTCCAAGTATAGGAAACTGCCAAAGGCTGCAACACTTAGTACTTTCACGAAACAACTTTACAGGAACCATTCCCTTTGAGCTTTTCACTATTTCATCTTTGACAACATCCTTGGATTTATCACAAAACTTGTTGAATGGTAGCATACCTGTACAAGTGGGAAACCTAAAAAATCTTGATTCCTTAGATTTGTCTGAGAATAATCTGTCTGATCACATTCCTCTATCCATAGGAGAATGCATAACGTTGGAGTACCTCAATTTGAAAGGAAATTCCTTACAGGGAATGATACCACCCTCTTTGGCATCACTCAAAGGACTTCAAAGTTTAGACCTTTCACAAAACAGCTTGGGTGGAACAATTCCTAATGATCTGCAGAATATTTCTGTCTTACAATACTTCAATGTGTCTCTTAACAAGTTGGTTGGTGAGGTACCAAAGGGAGGTGTCTTTCAAAATGCTAGTGCGTTAGTGGTCACCGGAAACAGTAATCTTTGTGGAGGTATTTCAGAACTGCATCTACCACCATGCCCTATCCATGGTAAGATACTAGCAAAACTTCATCCATTCATGTTGGTAGCAACGACAGTTAGCACAATCACTTTTCTTCTCATCATGTCAATTATTCTAACTATTTATCGGATGAGGAGCAAGAAACCATCTTTGGATTCACCAGCAGTATATCAAATGCCAAAAGCTTCGTATCAAAGCCTACACAACGCAACCAATGGGTTCTCAATCACAAATTTGATAGGCTGTGGAAGTTTTAGCTTTGTCTACAAAGGAATTCTCAGGTCAGAAGAGAAAGTTGTGGCCATAAAAGTCTTGAACCTTCAAAAAAGAGGATCTCAAAAGAGTTTCATCGCTGAATGCAATGCACTAAAACATATTAAACATCGAAATGTAGTTCCAATTTTGACATGTTGTTCTGGAATAGACTACAAAGGTGAGGAATTTAAAGCTCTAATTTTCGAGTACATGAAAAATGGAAGCTTAGAGCAGTGGTTGCATCCAAGTGAATTAAATGCAGAAAATTCAAGAACATATACATTAAACCTTGACCAAAGATTAAATATCATGATTGATGTTGCTTCTGCTTTATATTATCTTCATTATGAATGTGAGCAGTTGATCATTCATTGTGATTTGAAGCCAAACAATGTCCTTCTTGATGATGACATGATTGCTCATGTCAGTGATTTTGGCATAGCAAGGGTTTTCTCAACAATTAATGGTACGAGTTGGCAGCAAACAAGTACAATTGGCATAAAGGGGACTATCGGCTATACTCCCCCAGAGTATGGGATGGGTTCTGCGGTGTCTACAGCTGGTGACATGTACAGTTTTGGGATTCTTATTTTGGAGATGCTTACAGGAAGAAGACCCACAGATGAAATCTTTGAAGATGGTCAAAATTTGCATACCTTTGTGGAAAGCTCGTTTCCTGATAATCTTCTACAGGTTCTGGACCCATCCATTGTAGTAAACCAAGAACAAGAACATAAGAGTCAGAATCTTACTCCAACTGTTGAAAAGTGTGTAGTTTCACTCTTTGAAATTGGACTAGTTTGTTCAATGGAATCACCGAAAGAAAGAATGAATATGGTTGATGTTACTAGGGAGCTAAGTGAAATCAGAAAAACCTTTTCTTGCAATGTAAAATGA 3066 0.3741 MKYFSLMLLAFWSKYVHLLILFTLNSPWFIPKPVASASENETDHMALLEFRKSIFSDPHGIFLSWNTSTHFCNWHGITCNPMQQRVSELNLQGYKLKGFISPYIGNLSYMRNINLGDNNFYGKIPQEFGRLSQLHNLSVANNSLGGEIPTNLTGCTNLKLLHLGGNNFSDKIPIEIGSLRKLEQLFLLNNQFTGEIPSFMGNLSSLTLLSVGKNNLEGSIPQEICHLKNLTGIAFHVNKLTGTFPTCLYNMSSLTIVSATNNQLEGSLPTNMFHTLPNLHKLLISGNQITGSIPPSITNASFLSYLDADHNYLTGLVPSLSRLHGLQFLSLSENNLGDNSTDDLVFLTSLTNCSQMQVINIGFNNFGGHLPNSLGNLSMQVNRLYVGGNHISGEIPSSIGNLIGLVLLSMTDNLIDGIIPATFGKLQNMQKLRLGRNKLSGGIGAFIGNLSQLFHLDVGENMLEGKVPPSIGNCQRLQHLVLSRNNFTGTIPFELFTISSLTTSLDLSQNLLNGSIPVQVGNLKNLDSLDLSENNLSDHIPLSIGECITLEYLNLKGNSLQGMIPPSLASLKGLQSLDLSQNSLGGTIPNDLQNISVLQYFNVSLNKLVGEVPKGGVFQNASALVVTGNSNLCGGISELHLPPCPIHGKILAKLHPFMLVATTVSTITFLLIMSIILTIYRMRSKKPSLDSPAVYQMPKASYQSLHNATNGFSITNLIGCGSFSFVYKGILRSEEKVVAIKVLNLQKRGSQKSFIAECNALKHIKHRNVVPILTCCSGIDYKGEEFKALIFEYMKNGSLEQWLHPSELNAENSRTYTLNLDQRLNIMIDVASALYYLHYECEQLIIHCDLKPNNVLLDDDMIAHVSDFGIARVFSTINGTSWQQTSTIGIKGTIGYTPPEYGMGSAVSTAGDMYSFGILILEMLTGRRPTDEIFEDGQNLHTFVESSFPDNLLQVLDPSIVVNQEQEHKSQNLTPTVEKCVVSLFEIGLVCSMESPKERMNMVDVTRELSEIRKTFSCNVK 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01609 1021 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 794 1021 - -
Viun2g01609 1021 FunFam LRR receptor-like serine/threonine-protein kinase EFR 346 649 - -
Viun2g01609 1021 SUPERFAMILY Protein kinase-like (PK-like) 686 1009 IPR011009 -
Viun2g01609 1021 SMART LRR_typ_2 402 425 IPR003591 -
Viun2g01609 1021 SMART LRR_typ_2 426 448 IPR003591 -
Viun2g01609 1021 SMART LRR_typ_2 131 155 IPR003591 -
Viun2g01609 1021 SMART LRR_typ_2 203 227 IPR003591 -
Viun2g01609 1021 SMART LRR_typ_2 251 275 IPR003591 -
Viun2g01609 1021 SMART LRR_typ_2 276 300 IPR003591 -
Viun2g01609 1021 SMART LRR_typ_2 571 594 IPR003591 -
Viun2g01609 1021 SMART LRR_typ_2 450 474 IPR003591 -
Viun2g01609 1021 SMART LRR_typ_2 523 547 IPR003591 -
Viun2g01609 1021 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
Viun2g01609 1021 Gene3D Ribonuclease Inhibitor 274 341 IPR032675 -
Viun2g01609 1021 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
Viun2g01609 1021 Gene3D Ribonuclease Inhibitor 40 199 IPR032675 -
Viun2g01609 1021 ProSiteProfiles Protein kinase domain profile. 712 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01609 1021 SUPERFAMILY L domain-like 351 634 - -
Viun2g01609 1021 Gene3D Phosphorylase Kinase; domain 1 694 793 - -
Viun2g01609 1021 FunFam LRR receptor-like serine/threonine-protein kinase EFR 683 793 - -
Viun2g01609 1021 Gene3D Transferase(Phosphotransferase) domain 1 794 1020 - -
Viun2g01609 1021 SMART serkin_6 712 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01609 1021 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 81 345 - -
Viun2g01609 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Viun2g01609 1021 PANTHER OS04G0122200 PROTEIN 114 230 - -
Viun2g01609 1021 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Viun2g01609 1021 Gene3D Ribonuclease Inhibitor 202 273 IPR032675 -
Viun2g01609 1021 Gene3D Ribonuclease Inhibitor 342 645 IPR032675 -
Viun2g01609 1021 Pfam Protein kinase domain 714 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01609 1021 SUPERFAMILY L domain-like 40 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01609 Viun-Chr2 25940454 25944308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01609 40 1016 Receptor kinase-like Gene Family AT3G47570 44.636 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun2g01609 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01609 - - gmx:100801459 1404.81