Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01605 ATGCCCCCGAAATGGTCTTTAGGCTATCATCAATGCCATTCGAGTTATTTATCTGATCAGAGAGTTCTGGAGGTTGCTAAAACGTTCCAGAAGAAGTGCATACCATGTGACGTGATATGGATGGATACTGATTACATGGATGGTCTTCGTGTTTTCACATTTGACAAGAAACGTTTCCAAGACCCCATGTCTTTGGTGAAAGATCTCCGTAGTAGTGGTTGTAAAGTCATTTGGATGCTTGATCCTGGAATCAAGCTGGAAGAGGGTTATTTTGTATATGACAGTGGTTCTAAAGATGATGTTTGGATCCAAAATGAAGATGGAACTCCTTTCATAGGGGAGGTGTGGCCTGGGCCTTGTGTCTTCCCCGACTATACTCAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTCAAGGATTTCATTTCCAATGGTGTTGATGGTATATGGAATGATATGAACGAACCAACTATTTTTAAGGTTGAAACAAATACAATGCCTGATAGCAATGTTCATAGAGGAGATAGTGAACTTGGTGGGCGACAGAATCATTCTTTCTATCATAATGTGTATGGTCTTCTGATGGCAAGATCGACCTATGAAGGCATGAAACTAGCTAATGAAGAGAAACGTCCTTTTGTTCTTACAAGAGCTGGATTTATTGGCAGCCAACGGTATGCAGCAACATGGACTGGTGATAATCTTTCGACCTGGGAGCATCTTCATATGAGTATCTCCATGGTACTTCAGCTGGGACTTAGTGGTCAGCCATTTTCAGGTGCTGATATTGGTGGATTTGCTGGAAATGCTACACCTAAACTTTTTGGAAGGTGGATGGGTGTTGGTTCCTTGTTTCCCTTTTGCCGAGGGCATTCTGAAGCTTGCACCACTGATCATGTACCTTGGGCTTTTGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGAAGAGGCGATACCGCCTAATCCCACTTATCTACACTCTTTTTTATTTTGCTCATACACGGGGCACTCCAGTGGCAACCCCTACTTTCTTTGCTGATCCAAAAGATCCTAGCCTGAGGAAGCTTGAAAATTCGTTTTTGCTCGGTCCAGTCTTAGTGTATGCAAGCACCATACATGCACAGGGGTTGGATAAATTGGAGATTACCTTGCCTAAGGGGATATGGTTGGGTTTTGATTTCGACGATGCACATCCGGATTTGCCAGCCTTATACTTGAAAGGTGGTTCTATTATTCCTGTGGGTCTCTCTCTTCAGCATGTTGAAGAAGCTAACCCTTCAGATGATTTGACTCTTCTCGTGGCTTTAGACGAACATGGAAAAGCTGAAGGTGTTCTTTTTGAGGATGATGGTGATGGATACGGATTCACAAAAGGCAATTATTTATTAACACATTATGTGGCTGATCTTAAATCATCAGTTGTTACTGTGAGTATACACAAAACGGAAGGATCATGGGAAAGGCCAAAACGGCGCCTGCATATTCAATTATTGCTGGGTGGGGGTGCAATGCTTGATACATGGGGAACTGATGGAGAAGTTCTGCAACTAATCTTGCCTTCTGAGGATGAGGTGTTGAAGCTAGTATCTACTAGTGAGAAGCATTACAAGGACCGCTTAGAAAGTGCAATTCCAATTCCTGATGTGGAAGAGGTTTCTGGACCCAAGAGAACAGAAATGGCTCTCATTGAACGGAGAAGTGACATAGAAGACCATGTTAGTCAGATGTCTAAGGAGGTGTCTATTCGGACTGATGGAGGAAATATTGAGACCGGTGATTCTAATGACCCATTTTATACTACGGAGGTTTTCCCTTCTCGAGACGCTATGCTGAATTGGGCTCGAGAAGTAGCAAAAGAGAATGGATTTGTCCTTACTATTTTGAGGTCAGAAACATGTACAAGAACTAATAAAAAGAATAACAAAGGGAAGACATATGTAATAATGGGCTGTGAAAGGAGTGGAAAATATAGACCATACAAGAATACATTATCTAAGGTGACTAGTACCAAAAAATGTGAGTGCCCCTTCAAGCTAAGGGCAAAAGCTTTGAAAAAGAATGAAAAATGGGTTGTTAAGGTAATGTGTGGTCGTCACAACCATGAATTAGGGGAAACATTGGTGGTAGGACATTCATATGCTGGCCGATTAAGTGCTGAAGAGAAGTCTTTAGTCATTGATATGACAAAAAACATGGTGGAGCCGAGAAACATACTACTAACATTGAAAGATCATAATAATGAGACTACTATTAGGCATATTTATAATGCTCGACAAGCTTATCGATCTTCTCAGAAAGGTCCTAGGACAGAAATGCAACAGCTACAAAAGTTATTGGAATATGATCAATATGTATATTGGAATAGAAAGATGGATGGTTCTGATGCTATCAGTGATATATTTTGGGCACATCCAGATGCCATCAAACTTCTAAGCGCTTTCCATACTGTCTTGCTCCTTGATAATACTTATAAAGTCAATAGGTATAAATTGCCACTACTTGAGATTGTTGGTGTTACTTCAACAGAGTTAACATTCTCTGTGGCATTTGCTTATCTAGAGTCTGAGCAAGTTGATAACTTCACTTGGGCACTGGAGAAGTTAAGAGAATTGATTGTCAAAGACAGTGAGATGCCTCCAGTAATTGTAACTGTAAGAGACACTGCTCTGATGGATGCAGTGCAGGCAGTCTTTCCGAGCTCTTCTAATTTGTTATGTCGTTTTCATATAATCAAGAATGTGAAGGCCAAATGCAAGATGATGGTTCATCCGAAGGAGCAATATGACTTGGTGATGGATGCATGGCACAATGTTATGAATTCTCCTAACGAGGGTGAGTATACGCATCGTTTGGCATTATTTGACAAAGTTTGCTCAGATTTTCCAAATTTTGGTGATTATGTGAAAAATACGTGGCTTACTCCTCATAAGGAAAAATTTGTCACGGCATGGATAGATCGAGTGATGCATTTGGGTAACACAACACTTAACAGATCGGAAACAGCACATTGGAGGTTGGAGAACTTGCTTGAAGATAGTGCGGGGGACATTTGTAGTTGTTGGGATGCTATAAATAACATGATTAAATTGCAACACAAGGAGATTAAAGTGTCATTTGAGAAAAGCATAAATACAGTGGAATACAATACTCCATTCTACAAAATGTTGGTGGGATTTGTATCAAGGAGTGCATTGAGTTATATATCTGATCAATATGACCGAATTAAGACCATTGGCACTGACAGTTCTATATGTGGTTGCACAATTAGAACTACACATGGTCTACCTTGTGCATGTGAACTTGCTAGGTACAATATACCCTTGCAGGTAGTTCAAGATCATGGCACTAGGTTCAATTCCAGTTTCCAAGAAATGAATGAAGAGGGGTCTGAAGTATCATTGCAATCAGTACCATTGCAGGCAATTCATATTCATTGGAGGAGGTTAAACTTCAGTGTCCAAGAAATGAGCGAAGAGGGGTCTGAGGTATCACTACAACGTGAAATTGATGCTTTGCACAAGCAATTTCAGGAACTTGATTATGCTGGAAAAGTTACTCTAAAGGCCAAATTGCGTGAACTAGCCTTGCCTGATATAACTTTAATGTGTTCAGCTCTGGAAAGGGTAAGAACAAATGATGCTCCACAGGATTTAGGATGGAAAAGAGATAAATCAGTTGAATGTGATCCTTTGTATTGGGAGCATATAGATTCACCGCATTCTGACCATTATTGCATCACTCACCCTTCATCTGAGAAACCAGTCCATGAGTCTAATAGCATGGAAGTTTTACCATCAATGGACCAAATTCAGGTTGAAGTTCATCCATTTAATGAAGGCATTGTAGATGTGAAAGCAGAAGAGAACTGTGGTTAG 3879 0.406 MPPKWSLGYHQCHSSYLSDQRVLEVAKTFQKKCIPCDVIWMDTDYMDGLRVFTFDKKRFQDPMSLVKDLRSSGCKVIWMLDPGIKLEEGYFVYDSGSKDDVWIQNEDGTPFIGEVWPGPCVFPDYTQSKVRAWWANLVKDFISNGVDGIWNDMNEPTIFKVETNTMPDSNVHRGDSELGGRQNHSFYHNVYGLLMARSTYEGMKLANEEKRPFVLTRAGFIGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPFSGADIGGFAGNATPKLFGRWMGVGSLFPFCRGHSEACTTDHVPWAFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTRGTPVATPTFFADPKDPSLRKLENSFLLGPVLVYASTIHAQGLDKLEITLPKGIWLGFDFDDAHPDLPALYLKGGSIIPVGLSLQHVEEANPSDDLTLLVALDEHGKAEGVLFEDDGDGYGFTKGNYLLTHYVADLKSSVVTVSIHKTEGSWERPKRRLHIQLLLGGGAMLDTWGTDGEVLQLILPSEDEVLKLVSTSEKHYKDRLESAIPIPDVEEVSGPKRTEMALIERRSDIEDHVSQMSKEVSIRTDGGNIETGDSNDPFYTTEVFPSRDAMLNWAREVAKENGFVLTILRSETCTRTNKKNNKGKTYVIMGCERSGKYRPYKNTLSKVTSTKKCECPFKLRAKALKKNEKWVVKVMCGRHNHELGETLVVGHSYAGRLSAEEKSLVIDMTKNMVEPRNILLTLKDHNNETTIRHIYNARQAYRSSQKGPRTEMQQLQKLLEYDQYVYWNRKMDGSDAISDIFWAHPDAIKLLSAFHTVLLLDNTYKVNRYKLPLLEIVGVTSTELTFSVAFAYLESEQVDNFTWALEKLRELIVKDSEMPPVIVTVRDTALMDAVQAVFPSSSNLLCRFHIIKNVKAKCKMMVHPKEQYDLVMDAWHNVMNSPNEGEYTHRLALFDKVCSDFPNFGDYVKNTWLTPHKEKFVTAWIDRVMHLGNTTLNRSETAHWRLENLLEDSAGDICSCWDAINNMIKLQHKEIKVSFEKSINTVEYNTPFYKMLVGFVSRSALSYISDQYDRIKTIGTDSSICGCTIRTTHGLPCACELARYNIPLQVVQDHGTRFNSSFQEMNEEGSEVSLQSVPLQAIHIHWRRLNFSVQEMSEEGSEVSLQREIDALHKQFQELDYAGKVTLKAKLRELALPDITLMCSALERVRTNDAPQDLGWKRDKSVECDPLYWEHIDSPHSDHYCITHPSSEKPVHESNSMEVLPSMDQIQVEVHPFNEGIVDVKAEENCG 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01605 1292 ProSitePatterns Glycosyl hydrolases family 31 active site. 148 155 IPR030458 -
Viun2g01605 1292 Pfam Transcription factor AFT 646 704 IPR014842 GO:0000981|GO:0036086
Viun2g01605 1292 Pfam Glycosyl hydrolases family 31 1 413 IPR000322 GO:0004553|GO:0005975
Viun2g01605 1292 Pfam Domain of unknown function (DUF5110) 431 499 IPR033403 -
Viun2g01605 1292 CDD GH31_glucosidase_II_MalA 1 337 - -
Viun2g01605 1292 SUPERFAMILY (Trans)glycosidases 1 337 IPR017853 -
Viun2g01605 1292 Pfam MULE transposase domain 818 914 IPR018289 -
Viun2g01605 1292 PANTHER ALPHA-GLUCOSIDASE 1 468 - -
Viun2g01605 1292 Gene3D Glycosidases 1 321 - -
Viun2g01605 1292 Gene3D - 410 535 IPR013780 -
Viun2g01605 1292 Gene3D - 322 404 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01605 Viun-Chr2 25888864 25903068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01605 1 562 Glycoside Hydrolase AT3G23640 70.996 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun2g01605 Glyco_hydro_31 1.3e-122 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01605 - - vun:114172722 2654.01